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. 2019 Apr 3;23(4):389–398. doi: 10.1007/s00792-019-01091-x

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© The Author(s) 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

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Fig. 2 — Transcriptomic read mapping pattern of the CODH-II gene cluster (a) and the ECH gene cluster (b). Part of genome-wide overview of reads mapped to the C. pertinax draft genome at samples in the CODH-II gene cluster (a) and the ECH gene cluster (b). Read abundance was displayed in a logarithmic scale of 1–30,000 by Integrative Genomics Viewer (Thorvaldsdottir et al. 2013). Red box, DEG under 100% CO; White box, not DEG under 100% CO. Positions of predicted sigma⁷⁰ promoter sequence was predicted using BPROM with high linear discrimination function score (> 5; Solovyev and Salamov 2011). Black arrows, the position of predicted sigma⁷⁰ promoter sequence. Red arrow, the position of predicted sigma⁷⁰ promoter sequence with already known CooA-binding site