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. 2019 Jun 4;10:729. doi: 10.3389/fpls.2019.00729

Figure 2.

Figure 2

Phylogenetic analysis of miR156-targeted SPL genes from different plants including avocado, mango, and macadamia. (A) miR156-targeted SPL phylogenetic tree constructed with Maximum likelihood analysis of already published sequence from other crops (Additional file 1: Supplementary Table S4) with identified SPL transcripts from avocado, mango, and macadamia (See Materials and Methods section for tree parameters). (B) Sequence alignment of SBP domain of the SPL3/4/5, SPL2/10/11, SPL6/13, and SPL9/15. The unique or dissimilar sequence from each clade is shown in the box. The SPL transcripts from other crops (Supplementary Table S2) were aligned with the identified transcripts from the tree crops. Species codes: Aa, Arabis alpine; At, Arabidopsis thaliana; Bn, Brassica napus; Br, Brassica rapa; Car, Cicer arietinum; Ch, Cardamine hirsute; Ci, Citrus unshiu; Csi, Citrus sinensis; Cs, Camelina sativa; Egr, Eucalyptus grandis; Ga, Gossypium arboretum; Gh, Gossypium hirsutum; Gr, Gossypium raimondii; Gm, Glycine max; Ha, Helianthus annuus; Jc, Jatropha curcas; Mci, Macadamia integrifolia; Md, Malus domestica; Mi, Mangifera indica; Mn, Morus notabilis; Mt, Medicago truncatula; Pa, Persea americana; Pe, Populus euphratica; Ph, Petunia x hybrida; Rc, Ricinus communis; Sl, Solanum lycopersicum; Vv, Vitis vinifera.