Table 1.
Genome characteristics of sequenced strains and related isolates
| Genome Name/Sample Name | IMG Genome ID | Genome Size | Gene Count | CRISPR Count | GC % | CDS Count | CDS % | rRNA Count | Pseudogene Count | Horizontally Transferred Count | Horizontally Transferred % | Lifestyle |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Acetobacteraceae bacterium 868 | 2734482192 | 2107276 | 2111 | 1 | 43 | 2032 | 96.26 | 15 | 14 | 342 | 16.2 | Host associated |
| Acetobacteraceae bacterium 880 | 2716885010 | 1923586 | 1874 | 2 | 43 | 1798 | 95.94 | 15 | 7 | 276 | 14.73 | Host associated |
| Roseomonas rosea DSM 14916 | 2585427600 | 5342582 | 5093 | 0 | 71 | 5027 | 98.7 | 10 | NA | 60 | 1.18 | Free-living |
| Saccharibacter sp. AM169 | 2617271045 | 1978091 | 1785 | 2 | 59 | 1723 | 96.53 | 6 | NA | 37 | 2.07 | Host associated |
| Gluconobacter oxydans 621H | 637000122 | 2922384 | 2742 | 0 | 61 | 2664 | 97.16 | 12 | NA | 3 | 0.11 | Free-living |
| Acetobacter aceti ATCC 23746 | 2516653054 | 3690768 | 3510 | 3 | 57 | 3442 | 98.06 | 9 | 130 | 195 | 5.56 | Free-living |
| Acetobacter tropicalis DmCS_006 | 2609460235 | 3746694 | 3494 | 2 | 55 | 3436 | 98.34 | 3 | NA | 81 | 2.32 | Host associated |
| Gluconobacter japonicus R-49117 | 2684622537 | 3151336 | 3071 | 0 | 56 | 3015 | 98.18 | 3 | NA | 56 | 1.82 | Free-living |
| Acetobacter tropicalis NBRC 16470 | 2667527850 | 3500391 | 3248 | 3 | 56 | 3190 | 98.21 | 3 | NA | 75 | 2.31 | Free-living |
| Acetobacter pomorum DmCS_004 | 2617271320 | 2843884 | 2750 | 2 | 52 | 2693 | 97.93 | 3 | NA | 19 | 0.69 | Host associated |
| Acetobacter malorum LMG 1552 | 2713897234 | 344275 | 3250 | 0 | 58 | 3194 | 98.28 | 3 | NA | 62 | 1.91 | Free-living |
| Azospirillum brasilense FP2 | 2551306490 | 6885108 | 6972 | 3 | 68 | 6889 | 98.81 | 2 | NA | 9 | 0.13 | Free-living |
| Escherichia coli 100269_aEPEC | 2698536335 | 5098872 | 5163 | 0 | 50 | 4948 | 95.84 | 10 | NA | 3 | 0.06 | Free-living |
| Asaia platycodi SF2.1 | 2574180177 | 3528906 | 3054 | NA | 60 | 3005 | 98.4 | 49 | 44 | 184 | 5.89 | Host associated |
| Acetobacter malorum DmCS_005 | 2597490292 | 3512607 | 3125 | 5 | 57 | 3066 | 98.11 | 4 | NA | 3 | 0.10 | Host associated |
Entries in bold indicate bacterial strains whose genomes were fully sequened in this study