TABLE 2.
Dysregulated proteins involved in competitive growth advantage
| GI no., descriptiona | Protein abundance ratiob
|
COG categoryc | |||
|---|---|---|---|---|---|
| UV-Space | UV-Mars | Dark-Space | Dark-Mars | ||
| 500857672, nonribosomal peptide synthetase* | 0.730 | 0.840 | 1.157 | 0.920 | SMB |
| 500857673, polyketide synthase | 0.790 | 0.813 | 0.627 | 0.812 | SMB |
| 500857674, polyketide synthase | 0.879 | 0.739 | 0.557 | 0.793 | SMB |
| 500857675, polyketide synthase | 0.958 | 0.764 | 0.472 | 0.825 | SMB |
| 500859561, chemotaxis protein | −0.278 | 0.110 | 0.655 | −0.085 | CM |
| 500859564, chemotaxis protein | 0.232 | 0.512 | 1.099 | 0.424 | CM |
| 500858269, chemotaxis protein CheV | −0.123 | 0.007 | 0.681 | −0.116 | CM |
| 500858470, chemotaxis protein CheW | −0.051 | 0.150 | 0.776 | 0.076 | CM |
| 500858471, chemotaxis protein CheC | 0.046 | 0.327 | 0.878 | 0.054 | STM |
| 500860007, methyl-accepting chemotaxis protein | 0.128 | 0.392 | 0.730 | 0.221 | CM |
| 500859562, methyl-accepting chemotaxis protein | −0.062 | 0.111 | 1.024 | 0.202 | CM |
| 500858139, flagellin | 0.140 | 0.263 | 0.654 | 0.499 | CM |
| 500858460, flagellar basal body-associated protein FliL | −0.452 | −0.529 | 1.081 | −0.437 | CM |
| 500858457, flagellar hook assembly protein FlgD | −0.684 | −0.846 | 0.520 | −0.669 | CM |
| 500858451, flagellar motor switch protein FliG | −0.093 | 0.160 | 0.614 | −0.091 | CM |
*, P ≤ 0.05 (one-way ANOVA).
The values shown represent protein abundance ratios (log2) normalized to the ground control.
SMB, secondary metabolite biosynthesis, transport and catabolism; CM, cell motility; STM, signal transduction mechanisms.