Table 3.
Sensitivity of “testing history” method estimates to the type of testing history information available
| Staging scenarios compared | Information used by the “testing history method” | Specimens | Model performance: predicted vs. observed infection duration |
||
|---|---|---|---|---|---|
| Results included at each observation1 |
Observations included | N/n | ICC | RMS difference2 | |
| “Fiebig-like”: same-day tests, vs.results from different days | RNA (qualitative), p24, 3G, 2G, WB | Same day | 30/104 | 0.698 | 4.1 |
| RNA (qualitative), p24, 3G, 2G, WB | Two days (two bleeds apart) | 30/104 | 0.715 | 3.7* | |
| Newer Assays | RNA (qualitative), 3G, WB | Same day | 14/64 | 0.739 | 4.3 |
| RNA (qualitative), 4G, Geenius | Same day | 14/64 | 0.698 | 5.3* | |
statistically significant difference in prediction accuracy between model scenarios at a level of p<0.05.
Abbreviations: ICC = intraclass correlation; RMS = root mean square; 3G = 3rd Generation (IgM-sensitive antibody assays); 2G = 2nd Generation (Recombinant IgG-sensitive antibody assays); 4G = 4th Generation (p24 antigen/antibody assays); WB = Western blot; N = unique individuals; n = specimens from different timepoints
For these analyses the testing history was assumed not to include the quantitative viral load.
RMS = root mean square – difference between predicted and observed data was calculated as a measure of estimation error