. 2019 May 22;8:e44707. doi: 10.7554/eLife.44707

Table 2. Amino acids at the AAV2-AAVR interface.

Residues of AAVR are listed if any non-hydrogen atom is within 4.5 Å of any non-hydrogen AAV2 atom, et vice versa. This criterion corresponds approximately to the distance expected between methyl groups that are in van der Waals contact, and is intermediate between that of hydrogen-bonding and solvent exclusion. However, to assess the potential for specific interactions, readers are encouraged to inspect the deposited coordinates and maps (PDBid 6NZ0/EMD-0553).

AAVR residues close to AAV2:
Arg₄₀₆	Ser₄₁₃	Ile₄₁₉	Thr₄₂₃	Ser₄₂₅	Thr₄₂₆	Val₄₂₇	Asp₄₂₉	Ser₄₃₁	Gln₄₃₂	Ser₄₃₃	Thr₄₃₄
Asp₄₃₅	Asp₄₃₆	Asp₄₃₇	Lys₄₃₈	Ile₄₃₉	Tyr₄₄₂	Glu₄₅₈	Asp₄₅₉	Ile₄₆₂	Lys₄₆₄
AAV2 residues close to AAVR:
Gln₂₆₃	Ser₂₆₄	Gly₂₆₅	Ala₂₆₆	Ser₂₆₇	Asn₂₆₈	His₂₇₁	Asn₃₈₂	Gly₃₈₃	Ser₃₈₄	Gln₃₈₅
Arg₄₇₁	Trp₅₀₂	Thr₅₀₃	Asp₅₂₈	Asp₅₂₉	Gln₅₈₉	Lys₇₀₆	Val₇₀₈