Table 3.
Summary table of GEO DataSets and TCGA HNSC datasets “Cancer vs Normal” differential analyses.
| miRNA Name | GEO DataSets | TCGA HNSC Datasets | ||||
|---|---|---|---|---|---|---|
| GSE45238 | GSE31277 | |||||
| FC Cancer vs Normal | p-Value * | FC Cancer vs Normal | p-Value * | FC Cancer vs Normal | p-Value ** | |
| Up-regulated | ||||||
| hsa-miR-196a-5p | 8.096 | 9.45 × 10−12 | 8.132 | 1.42 × 10−6 | 12.145 | 3.12 × 10−19 |
| hsa-miR-196b-5p | 1.791 | 2.05 × 10−8 | 1.874 | 2.00 × 10−4 | 11.639 | 5.43 × 10−20 |
| hsa-miR-503-5p | 5.010 | 4.83 × 10−21 | 2.622 | 4.69 × 10−4 | 4.044 | 3.86 × 10−19 |
| hsa-miR-18a-5p | 2.646 | 2.34 × 10−10 | 1.554 | 2.66 × 10−3 | 2.829 | 8.10 × 10−10 |
| Down-regulated | ||||||
| hsa-miR-379-5p | −3.513 | 1.83 × 10−11 | −2.345 | 9.63 × 10−4 | −3.298 | 1.29 × 10−10 |
| hsa-miR-195-5p | −1.778 | 1.25 × 10−12 | −1.620 | 1.71 × 10−6 | −3.510 | 7.79 × 10−14 |
| hsa-miR-411-5p | −5.574 | 3.25 × 10−16 | −2.542 | 6.18 × 10−3 | −4.160 | 2.03 × 10−10 |
| hsa-miR-99a-5p | −2.732 | 4.83 × 10−16 | −2.441 | 7.82 × 10−5 | −5.746 | 1.85 × 10−27 |
| hsa-miR-133a-3p | −4.202 | 6.37 × 10−9 | −3.446 | 8.47 × 10−3 | −7.055 | 2.93 × 10−4 |
| hsa-miR-1-3p | −9.783 | 3.47 × 10−9 | −5.786 | 2.16 × 10−3 | −10.663 | 8.80 × 10−6 |
| hsa-miR-375-3p | −16.589 | 1.95 × 10−17 | −3.198 | 5.12 × 10−4 | −18.183 | 1.33 × 10−11 |
* p-values were already calculated by GEO2R software; ** p-values were calculated by applying Student’s t-test.