Table 1. Summary of the 16S ribosomal RNA gene sequence based metagenomic analysis results of the datasets used in this study.
Country | Number of samples used in this study* | Average read length | Number of reads used in this study^ | Average number of reads per sample | Number of OTUs | Number of genera | No of unknown OTUs | Reads mapping to known genera (%) | Reads mapping to unknown genera (%) | ENA Accession Numbers | References |
Burkina Faso | 9 | 254 | 173012 | 19223.56 | 1257 | 57 | 26 | 91.93039 | 8.06961 | ERP000133 | [20] |
Egypt | 8 | 253 | 383613 | 47951.63 | 3368 | 121 | 81 | 64.55591 | 35.44409 | PRJNA328966 | [58] |
China | 57 | 402 | 245706 | 4310.632 | 3551 | 94 | 26 | 70.46069 | 29.53931 | PRJDB1664 | [16] |
Taiwan | 53 | 402 | 269446 | 5083.887 | 3509 | 89 | 24 | 71.48267 | 28.51733 | PRJDB1664 | [16] |
Thailand | 50 | 400 | 326087 | 6521.74 | 3922 | 108 | 34 | 71.77727 | 28.22273 | PRJDB1664 | [16] |
Indonesia | 55 | 401 | 354766 | 6450.291 | 3961 | 117 | 39 | 75.82541 | 24.17459 | PRJDB1664 | [16] |
Japan | 79 | 403 | 457678 | 5793.392 | 3572 | 85 | 29 | 67.03656 | 32.96344 | PRJDB1664 | [16] |
India | 14 | 175 | 15072369 | 1076598 | 5660 | 152 | 49 | 76.8114 | 23.1886 | SRP041693, SRP055407, DRA002238 | [59] |
Malaysia | 6 | 186 | 4196544 | 699424 | 4287 | 105 | 34 | 78.07753 | 21.92247 | SRP079939 | [60] |
Italy | 13 | 262 | 205151 | 15780.85 | 2347 | 73 | 21 | 57.50687 | 42.49313 | ERP000133 | [20] |
Spain | 40 | 448 | 1479424 | 36985.6 | 3693 | 101 | 37 | 66.12199 | 33.87802 | PRJNA350839 | [61] |
Sweden | 9 | 98 | 2531749 | 281305.4 | 5085 | 95 | 34 | 61.0206 | 38.9794 | ERP020401 | [62] |
Colombia | 30 | 217 | 513077 | 17102.57 | 4030 | 102 | 41 | 53.73231 | 46.26769 | ERP003466 | [39] |
U.S.A | 62 | 512 | 2122144 | 34228.13 | 4207 | 107 | 38 | 68.82446 | 31.17554 | PRJNA297510 | [63] |
Argentina | 10 | 483 | 88490 | 8849 | 1470 | 58 | 25 | 69.30452 | 30.69548 | SRP062999 | [44] |
495 | 13346887 | 53919 |