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. 2019 Jun 13;14(6):e0218265. doi: 10.1371/journal.pone.0218265

Table 7. The oogenic germline starvation response in different genetic backgrounds.

Genotype Relevant function for this study References Human ortholog Starvation response Re-feeding
WT Control [7, 8] - Shrunken gonad Completely recovered
ced-3(n1286) The only effector caspase [7, 20] Isoform 1 Caspase-2 Shrunken gonad Completely recovered
      Not required Not required
ced-3(n717) The only effector caspase [7, 20] Isoform 1 Caspase-2 Not required Not required
ced-3(ok2734) The only effector caspase Isoform 1 Caspase-2 Not required Not required
lin-35(n745) Causes starvation-induced germline apoptosis [26] Rb Not required Not required
daf-16(mgDf50) Regulates dauer diapause [28] FoxO Not required Not required
skn-1(zu135) Dietary restriction and other stresses response [30] Nrf Not required Not required
pha-4(zu225) Dietary restriction and other stresses response [30] FoxA Not required Not required
alg-1(gk214) miRNA pathway and proliferation [13] Argonaut Not required Not required
rsks-1(ok1255) Increases resistance to starvation [31] Putative ribosomal protein S6K Not required Not required
ife-1(bn127) Regulates germline progenitor number [32] eIF4e Not required Not required
gla-3(op212) Increased germline apoptosis [33] - Not required Not required
cep-1(gk138);ced-1::gfp Regulates DNA-damage-induced germline apoptosis [34] p53 transcription factor Not required Not required

Hermaphrodites from the different backgrounds were selected at the mid L4, starved for 5 days and observed daily under Nomarski microscopy to compare their gonad size to that under the oogenic germline starvation response using WT hermaphrodites as a control. At day 5, the hermaphrodites were refed for 3 days and observed daily under Nomarski microscopy to determine their gonad recovery, using WT hermaphrodites as a control.