Skip to main content
. 2019 Jun 13;6:89. doi: 10.1038/s41597-019-0101-y

Online-only Table 1.

Statistics of sequencing data for each sample.

Sample Total Raw Reads(Mb) Total Clean Reads(Mb) Total Clean Bases(Gb) Clean Reads Q20(%) Total Mapping Ratio% Uniquely MappingRatio% Accession number (Biosample)
X-EL35-1 32.79 30.31 9.78 98.75 82.79 76.97 SAMN10880015
X-EL35-2 32.67 30.17 9.69 98.82 80.71 72.02 SAMN10880016
X-EL35-3 32.58 30.04 9.70 98.68 81.33 76.37 SAMN10880017
X-EL36-1 32.28 29.26 9.59 98.34 85.30 76.21 SAMN10880018
X-EL36-2 31.96 28.86 9.50 98.61 94.53 79.67 SAMN10880019
X-EL36-3 30.29 27.61 8.96 98.73 91.97 80.36 SAMN10880020
X-EL38-1 32.05 29.53 9.50 98.79 79.21 73.29 SAMN10880021
X-EL38-2 31.58 29.07 9.38 98.79 85.37 77.24 SAMN10880022
X-EL38-3 32.46 29.62 9.63 98.26 89.61 81.99 SAMN10880023
Y-EL35-1 32.70 30.22 9.74 98.74 71.65 68.36 SAMN10880024
Y-EL35-2 32.63 29.85 9.71 98.66 70.39 64.96 SAMN10880025
Y-EL35-3 33.08 30.73 9.86 98.80 82.73 76.09 SAMN10880026
Y-EL36-1 32.71 29.77 9.72 98.68 83.51 70.43 SAMN10880027
Y-EL36-2 32.89 30.02 9.78 98.67 84.90 75.87 SAMN10880028
Y-EL36-3 32.54 29.09 9.69 98.48 82.47 74.05 SAMN10880029
Y-EL38-1 32.37 29.26 9.62 98.18 66.95 58.86 SAMN10880030
Y-EL38-2 32.98 30.29 9.82 98.71 82.08 74.71 SAMN10880031
Y-EL38-3 31.89 27.00 9.50 97.75 83.90 73.87 SAMN10880032
Z-EL35-1 33.01 30.53 9.83 98.76 94.94 87.08 SAMN10880033
Z-EL35-2 28.17 24.35 8.38 97.97 80.48 71.95 SAMN10880034
Z-EL35-3 32.90 30.23 9.78 98.66 94.43 87.15 SAMN10880035
Z-EL36-1 32.24 29.09 9.58 98.30 86.69 79.18 SAMN10880036
Z-EL36-2 32.68 29.88 9.71 98.59 93.01 84.9 SAMN10880037
Z-EL36-3 32.81 29.80 9.75 98.56 90.54 82.82 SAMN10880038
Z-EL38-1 25.26 22.06 7.50 98.05 89.97 82.28 SAMN10880039
Z-EL38-2 32.92 30.20 9.78 98.65 88.41 82.38 SAMN10880040
Z-EL38-3 22.48 19.16 6.70 97.86 89.56 80.46 SAMN10880041

X stands for Xiangfei, Y for Italia and Z for Zaomeiguixiang, Total Raw Reads (Mb): The reads amount before filtering, Unit: Mb. Total Clean Reads (Mb): The reads amount after filtering, Unit: Mb. Total Clean Bases (Gb): The total base amount after filtering, Unit: Gb. Clean Reads Q20(%): The Q20 value for the clean reads. Total Mapping Ratio: The percentage of mapped reads. Uniquely Mapping Ratio: The percentage of reads that map to only one location of reference. EL35: the berry begins to colour and soften, EL36: complete of veraison with an intermediate Brix, EL38: berry reaches harvest ripeness.