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. 2019 Jun 6;8(1):827–840. doi: 10.1080/22221751.2019.1622455

Figure 4.

Figure 4.

Gene families, including T4SS, virulence factors, and CRISPR-Cas systems, differ in adherent/invasive C. showae strains. (A) Gene families that differ in their presence/absence among C. showae isolates. A subset of genes of interest are labelled with Prokka and UniRef90 annotations when available. Isolates are clustered based on “Euclidean” distances using “complete” method. (B) We searched for Type IV secretion proteins in each C. showae genome, which are displayed here by position and direction based on Prokka annotations.