Fig. 7.

Differentially methylated CpG sites identified between pig breeds. a Box plot of percent methylation of CpG sites at TEDC2, SLC22A18, EHD3, and NUDT7. b Box plot of percent methylation of CpG sites at IPO13, COMMD6, SPB, and SLC2A4RG. The y-axis for both box plots represents methylation level. Genes associated with the CpG are given in parentheses. Box plot represents the range of variation and median value. c Relative transcript amount that adjusts the transcript amount of Duroc to 100% as represented on the x-axis and compared with other breeds. The y-axis shows gene names. * P < 0.05, ** P < 0.01