Skip to main content
. 2019 May 6;2019:543–552.

Table 2:

Plausibility and completeness of the UMLS knowledge embeddings. _SN indicates the incorporation of the Semantic Networkin the embeddings, which otherwise were learned only from the Metathesaurus.

Model UMLS Metathesaurus UMLS Semantic Network
RTC-P RTC-R PPA H@10 MRR RTC-P RTC-R PPA H@10 MRR
TRANSE 0.7712 0.6479 0.9340 0.2161 0.1400
TRANSD 0.9080 0.8895 0.9734 0.2780 0.1674
TRANSE_SN 0.8649 0.8019 0.9746 0.2240 0.1425 0.5105 0.7790 0.9150 0.7125 0.4882
TRANSD_SN 0.9188 0.8915 0.9729 0.2775 0.1670 0.6840 0.8771 0.9017 0.7300 0.4680
GAN (TRANSE_SN+DISTMULT) 0.8959 0.8424 0.9833 0.2727 0.1650 0.6109 0.7898 0.9367 0.7883 0.5373
GAN (TRANSD_SN+DISTMULT) 0.9311 0.9130 0.9803 0.3164 0.1886 0.8419 0.8546 0.9200 0.7867 0.5236