. 2019 Jun 14;14(6):e0217724. doi: 10.1371/journal.pone.0217724

Table 1. NGS analysis of cultured human breast cancer MCF-7 cells.

DNAs extraction	QC score	Mean read depth	Variant call	VAF(%)
Promega	-0.004	472	GATA3p-355fs	50.6
Promega	-0.004	472	PIK3CApGlu545Lys	53.4
Beckman	-0.001	620	GATA3p-355fs	48.7
Beckman	-0.001	620	PIK3CApGlu545Lys	45.1
Qiagen	-0.002	706	GATA3p-355fs	49.9
Qiagen	-0.002	706	PIK3CApGlu545Lys	48.7
Takara Bio	-0.002	576	GATA3p-355fs	47.2
Takara Bio	-0.002	576	PIK3CApGlu545Lys	52.7

VAF, Variant allele fraction; CNV, Copy number variation