Table A13.

McDonnel 2013, Pathway Covering Using Covered Compound Sparseness Cost Function.

Pathway	Metabolites Covered
glycerol-3-phosphate shuttle	glycerone phosphate, NAD+
guanine and guanosine salvage	guanine, 5-phospho-alpha-d-ribose 1-diphosphate
ketolysis	coenzyme A, succinate, NAD+
pyruvate fermentation to (S)-lactate	(S)-lactate, NAD+
plasmalogen degradation	sn-glycero-3-phosphocholine
PRPP biosynthesis	D-ribose 5-phosphate, 5-phospho-alpha-d-ribose 1-diphosphate, AMP
pyrimidine deoxyribonucleosides degradation	uracil, 2’-deoxycytidine
super pathway of pyrimidine ribonucleosides degradation	uridine, uracil, cytidine, 5,6-dihydrouracil
stearate biosynthesis	coenzyme A, palmitate, AMP
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis	(S)-dihydroorotate, orotate, 5-phospho-alpha-d-ribose 1-diphosphate, dTMP