Table 1.
Statistical summary of the data that were generated by high-throughput small RNA sequencing in A. membranaceus.
| Type | Total | Percentage of Total (%) | Distinct | Percentage of Distinct (%) |
|---|---|---|---|---|
| Raw reads | 9,685,427 | 100.00 | 3,697,922 | 100 |
| 3ADT & length filter | 3,020,110 | 31.18 | 949,768 | 25.68 |
| Junk reads | 58,185 | 0.60 | 48,416 | 1.31 |
| Rfam | 840,690 | 8.68 | 100,245 | 2.71 |
| Repeats | 5584 | 0.06 | 1321 | 0.04 |
| Clean reads | 5,761,893 | 59.49 | 2,598,545 | 70.27 |
| rRNA | 625,393 | 6.46 | 59,659 | 0.62 |
| tRNA | 160,729 | 1.66 | 29,496 | 0.3 |
| snoRNA | 5296 | 0.05 | 1977 | 0.02 |
| snRNA | 7931 | 0.08 | 3860 | 0.04 |
| Other Rfam RNA | 41,341 | 0.43 | 5253 | 0.05 |