Table 2.
Pathogenic plant fungi included in the phylogeny.
| Species name | Phylum | Class | Subclass | Order | Family | No. of AGOs | No. of DCLs | No. of RdRPs |
|---|---|---|---|---|---|---|---|---|
| Puccinia graminis | Basidiomycota | Pucciniomycetes | Pucciniales | Pucciniaceae | 2 | 3 | 4 | |
| Ustilago hordei | Basidiomycota | Ustilaginomycetes | Ustilaginomycetidae | Ustilaginales | Ustilaginaceae | 1 | 1 | 2 |
| Schizosaccharomyces pombe | Ascomycota | Schizosaccharomycetes | Schizosaccharomycetales | Schizosaccharomycetaceae | 1 | 1 | 1 | |
| Aspergillus niger | Ascomycota | Eurotiomycetes | Eurotiomycetidae | Eurotiales | Aspergillaceae | 3 | 2 | 2 |
| Zymoseptoria tritici | Ascomycota | Dothideomycetes | Dothideomycetidae | Capnodiales | Mycosphaerellaceae | 3 | 1 | 3 |
| Blumeria graminis | Ascomycota | Leotiomycetes | Leotiomycetidae | Erysiphales | Erysiphaceae | 3 | 2 | 1 |
| Sclerotinia borealis | Ascomycota | Leotiomycetes | Leotiomycetidae | Helotiales | Sclerotiniaceae | 4 | 2 | 3 |
| Sclerotinia sclerotiorum | Ascomycota | Leotiomycetes | Leotiomycetidae | Helotiales | Sclerotiniaceae | 2 | 2 | 3 |
| Botrytis cinerea | Ascomycota | Leotiomycetes | Leotiomycetidae | Helotiales | Sclerotiniaceae | 2 | 2 | 3 |
| Colletotrichum graminicola | Ascomycota | Sordariomycetes | Hypocreomycetidae | Glomerellales | Glomerellaceae | 2 | 2 | 3 |
| Magnaporthe oryzae | Ascomycota | Sordariomycetes | Sordariomycetidae | Magnaporthales | Magnaporthaceae | 3 | 2 | 3 |
| Podospora anserina | Ascomycota | Sordariomycetes | Sordariomycetidae | Sordariales | Lasiosphaeriaceae | 2 | 2 | 4 |
| Neurospora crassa | Ascomycota | Sordariomycetes | Sordariomycetidae | Sordariales | Sordariaceae | 2 | 2 | 3 |
| Fusarium graminearum | Ascomycota | Sordariomycetes | Hypocreomycetidae | Hypocreales | Nectriaceae | 2 | 2 | 5 |
| Fusarium oxysporum | Ascomycota | Sordariomycetes | Hypocreomycetidae | Hypocreales | Nectriaceae | 3 | 2 | 4 |
| Nectria haematococca | Ascomycota | Sordariomycetes | Hypocreomycetidae | Hypocreales | Nectriaceae | 2 | 2 | 4 |
| Acremonium chrysogenum | Ascomycota | Sordariomycetes | Hypocreomycetidae | Hypocreales | Acremonium | 3 | 2 | 3 |
| Verticillium dahliae | Ascomycota | Sordariomycetes | Hypocreomycetidae | Glomerellales | Plectosphaerellaceae | 2 | 2 | 3 |
| Verticillium alfalfae | Ascomycota | Sordariomycetes | Hypocreomycetidae | Glomerellales | Plectosphaerellaceae | 1 | 2 | 2 |
| Verticillium nonalfalfae | Ascomycota | Sordariomycetes | Hypocreomycetidae | Glomerellales | Plectosphaerellaceae | 2 | 2 | 2 |