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. 2019 Jun 17;9:8672. doi: 10.1038/s41598-019-45128-9

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Occurrence of S. endobioticum chytrid core SCO genes and RAYH-genes in function of scaffold repeat content percentages. The proportion of candidate effector or SCO genes are compared against the scaffolds/contigs where repeats occur. The trend is shown as dotted lines. The S. endobioticum SCO chytrid core genes are mainly found on scaffolds and contigs with 0 to 30% repeat content. Candidate effector genes are found mainly on scaffolds and contigs with 0 to 40% repeat content but also on genomic sequences with up to 100% repeat content.