Table 1.
Axon volume and microtubule mass
Treatment | Axon diameter (μm) (±SEM) | Axon length (μm) (±SEM), # cells | Axon volume1_a(μm3) | Corrected axon volume1_b(μm3) | Microtubules per cross-section (±SEM), # cross-section profiles | Microtubules mass1_c | Microtubule profile density1_d |
---|---|---|---|---|---|---|---|
Control (24 hr) | 0.51 ± 0.07 n = 14 | 1024 ± 208 n = 8 | 209 | 459 | 22 ± 1.6 n = 41 | 22,528 | 110 |
Control (9 hr) | 0.58 ± 0.06 n = 16 | 4801_e | 127 | 278 | 27 ± 4.4 n = 16 | 12,960 | 104 |
165 nmnocodazole | 1.01 ± 0.16 n = 14 | 568 ± 124 n = 14 | 454 | 504 | 43 ± 3.9 n = 25 | 24,424 | 53 |
330 nm nocodazole | 2.00 ± 0.16 n = 21 | 270 ± 49 n = 14 | 848 | 511 | 66 ± 5.9 n = 21 | 17,820 | 21 |
Axon volume was calculated fromv = πr2 × l, wherer = radius and l = axon length (total outgrowth from dissociated cells).
Two adjustments for volume were made to correct for deviations from a perfect cylinder: (1) the frequency, length, and diameter of periodic varicosities were measured and then incorporated into the calculations (see Materials and Methods); (2) increasing nocodazole concentrations resulted in axons that appeared as flattened cylinders. Calculations were also adjusted for the flattening effect by assuming that the axon cross-section in the nocodazole-treated cultures was represented by an oval.
Microtubule mass was calculated by multiplying axon length (total outgrowth from dissociated neurons) by the average number of microtubules per axon cross-section.
Microtubule profile density refers to the density of cross-sectioned microtubules profiles per axonal cross-sectional area (μm2).
In this case, explant outgrowth from one explant was used instead of measuring the length of neurites from individual neurons.