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. 2019 May 28;75(Pt 6):528–535. doi: 10.1107/S2059798319006880

Table 2. Data-collection and refinement statistics for the single-particle reconstruction of TMV.

Data collection
 Accelerating voltage (kV) 300
 Nominal magnification 130 000
 Calibrated pixel size (Å) 1.067
 Total No. of movies collected 357
 Total fluence (e Å−2) 40
 No. of frames 40
 Defocus range (µm) −1.0 to −3.0
Data processing
 Final segments 109763
 Helical parameters
  Twist (°) 22.04
  Rise (Å) 1.41
 Gold-standard resolution (Å) 2.3
MolProbity statistics
 All-atom clashscore 2.41
 Ramachandran plot
  Outliers (%) 0
  Allowed (%) 3.97
  Favoured (%) 96.03
 Rotamer outliers (%) 0
 Cβ deviations (%) 0
Deviations from ideal values
 Bond lengths (µm) 0.007
 Bond angles (°) 1.030
 Chirality (Å3) 0.060
 Planarity (°) 0.009
 Dihedral (°) 8.534
Map–model CC
 Main chain (760 atoms) 0.68
 Side chain (513 atoms) 0.63
EMDB ID EMD-4928