Table 4.
SPC | Contributing Genes (Gene Name|GeneID) | Enriched GO Biological Processes |
---|---|---|
X6 | ADAM6|8755, FBP4|2167, FN1|2335, GAPDH|2597, KRT13|3860, KRT16|3868, KRT17|3872, LOC96610|96,610 | Cornification |
X2 | COL1A1|1277, COL1A2|1278, COL3A1|1281, FN1|2335, KRT13|3860, KRT14|3861, KRT16|3868, KRT17|3872, KRT5|3852, KRT6A|3853, SPARC|6678 | Cornificationa, keratinocyte differentiation, wound healing, cell-substrate junction assemblya, collagen fibril organizationa |
X9 | ACTB|60, ADAM6|8755, COL1A1|1277, COL1A2|1278, FN1|2335, LAMC2|3918, TGFBI|7045 | Skin morphogenesis, protein heterotrimerization, platelet activationa, cell junction assembly, cell junction organization, extracellular matrix organization, extracellular structure organization, blood vessel developmenta, cell adhesion |
X7 | ADAM6|8755, FABP4|2167, KRT16|3868, KRT17|3872, KRT5|3852, KRT6B|3854, LOC96610|96,610, PI3|5266 | Cornificationa, programmed cell death, cell death, keratinization, skin development |
X1 | KRT14|3861, KRT16|3868, KRT17|3872, KRT5|3852, KRT6A|3853, KRT6B|3854, KRT6C|286,887, S100A9|6280 | Cornificationa, intermediate filament cytoskeleton organizationa, cell death, hair cycle |
X3 | COL1A1|1277, COL1A2|1278, COL3A1|1281, KRT13|3860, KRT14|3861, KRT16|3868, KRT17|3872, KRT5|3852, KRT6A|3853, KRT6B|3854, KRT6C|286,887, SFN|2810 | Cornificationa, multicellular organism development, intermediate filament cytoskeleton organizationa, collagen fibril organization |
SPC gene sets listing both gene names and Entrez gene IDs; PANTHER annotation terms found to be enriched in each of the SPC gene sets. Annotation terms are reported in increasing order of p-value, with all p < 0.001. a indicates some lower level hierarchical terms omitted for brevity