Table 1.
Simulation parameter values
| Model Parameter | Variable name | Parameter value | Physical units |
|---|---|---|---|
| Number of nodes | n_nodes | 50 | 500 kb |
| Frictional coefficient | ζ | 1.0 | 1.4×10−6 Kg/s |
| Equilibrium spring length | Leq | 1.0 | 100 nm |
| Spring constant | ks | 0.25 | 0.004 pN/nm |
| Nuclear radius | nuc_radius | 5 | 0.5 μm |
| Repulsive force constant for NE | k_nuc | 0.35 | 0.6 pN |
| Capture radius for pairing | dist_capture | 0.5 | 50 nm |
| Magnitude of Langevin random force | σ | 0.15 | 0.24 pN |
| Magnitude of telomere force | ϕ | 0.15–0.6 | 0.24 – 1 pN |
| Unpairing rate constant | k_unpair | 0.001–0.1 | 0.01 – 1.0 s−1 |