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. 2019 Jun 12;10:707. doi: 10.3389/fpls.2019.00707

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Copyright © 2019 Ling, Brockmöller, Baldwin and Xu.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Features that affect the conservation of AltD and AltA between closely related plant species. (A,B) The portion of conserved AltD/AltA decreases with the distance between authentic and alternative splice site (SS) between two species. (C,D) The percentage of conserved AltD/AltA which the nearest alternative 5′/3′ SS generates transcripts with same or different open reading frame (ORF) between species. (E,F) The portion of conserved AltD/AltA decreases with changes in the distance between authentic SS and nearest inter-GT/AG sites between two species. (G,H) The percentage of conserved AltD/AltA in which that the nearest inter-GT/AG generates transcripts with same or different ORF between species. Nat, N. attenuata; Sly, Tomato; Ath, A. thaliana; Aly, A. lyrata. The asterisks indicate the significance as determined by Fisher’s exact test (P < 0.05).