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Summary of SLAF numbers and marker depths.
| Sample | Raw read numbers | SLAF numbers | SNP numbers | Homo-SNP numbers | Total depth (×) | Average depth (×) |
|---|---|---|---|---|---|---|
| M130 | 50,864,965 | 1,021,241 | 425,047 | 416,367 | 49,862,489 | 48.83 |
| jihua5 | 53,171,750 | 1,176,582 | 463,462 | 451,890 | 48,348,687 | 41.09 |
| RILs | 7,832,134 | 604,234 | 302,464 | 294,721 | 7,447,985 | 12.37 |
