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. Author manuscript; available in PMC: 2020 Feb 1.
Published in final edited form as: Arch Virol. 2018 Nov 13;164(2):649–652. doi: 10.1007/s00705-018-4098-x

Fig. 2.

Fig. 2

Phylogenetic tree for EkBV and selected related reference and non-reference sequences. Amino acid sequences of the open reading frame encoding the replicase were aligned using MUSCLE (9). A maximum-likelihood phylogenetic tree was constructed using the Bayesian Markov chain Monte Carlo method implemented in MrBayes version 3.2.6 (10), sampling across the default set of fixed amino acid rate matrices with 1,000,000 generations, discarding the first 25% as burn-in. The figure was produced using FigTree (available at http://tree.bio.ed.ac.uk/software/figtree/). The tree is midpoint-rooted, and selected nodes are labelled with posterior probability values. GenBank accession numbers are shown next to virus names.