Table 2:

Performance comparison among BiPathCNN, the base path−only CNN, and codon path−only CNN

Group	Tool	Evaluation on phage (%)			Evaluation on plasmid (%)
		TPR	FPR	AUC	TPR	FPR	AUC
Group A 100–400 bp	BiPathCNN	84.96	18.01	91.82	59.91	14.14	83.05
	Base path−only	81.86	24.58	87.50	56.96	17.60	78.50
	Codon path−only	86.84	20.47	91.85	62.15	16.65	82.26
Group B 400–800 bp	BiPathCNN	90.75	8.37	97.21	74.56	13.37	89.64
	Base path−only	88.76	17.46	93.87	72.37	18.86	85.57
	Codon path−only	84.95	5.93	96.57	82.98	23.10	88.32
Group C 800–1,200 bp	BiPathCNN	95.24	7.75	98.54	78.09	10.95	91.84
	Base path−only	92.09	17.71	95.47	73.31	15.12	88.02
	Codon path−only	94.60	12.44	97.55	73.17	12.41	89.22