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. 2019 Jun 20;9:8934. doi: 10.1038/s41598-019-44871-3

Table 3.

Genetic parameters of core subsets selected by purely analytical procedures and by mixed procedures (analytical + ‘expert knowledge’).

Strategy ID Bruvo genetic distance D CE S H H E N E C V (%)
E-E E-NE A-NE E-E
Swiss National Pear Inventory 0.591 0.834 4.967 0.830 7.73 100.00
Random core 0.589 0.354 0.362 0.932 4.915 0.824 7.46 74.30
Purely analytical procedures
A-FNKAll 0.636 0.463 0.394 0.867 5.190 0.867 9.80 97.00
M-FNKAll 0.606 0.424 0.384 0.859 5.131 0.852 9.05 98.00
Mixed procedures (analytical + ‘expert knowledge’)
A-OMinAll 0.624 0.388 0.367 0.858 5.093 0.852 8.85 90.00
A-OSupAll 0.623 0.396 0.367 0.859 5.100 0.853 9.00 88.50
A-OSupNoPrior 0.625 0.385 0.368 0.858 5.097 0.853 8.91 87.50
M-OMinAll 0.620 0.390 0.367 0.855 5.079 0.849 8.68 89.50
M-OSupAll 0.617 0.385 0.366 0.854 5.077 0.847 8.69 89.00
M-OSupNoPrior 0.620 0.384 0.366 0.854 5.077 0.848 8.68 89.00
M-FYKAll 0.618 0.392 0.364 0.852 5.079 0.847 8.74 90.00

Footnotes:

E-E: Average entry to entry distance, E-NE: average distance between each entry and the nearest entry, A-NE: Average distance between each genotype of the collection and the nearest entry, DCE: average genetic distance of Cavalli-Sforza and Edwards, SH: Shannon-Weaver diversity index, HE: Nei diversity index, CV: allelic coverage in percentage.