Table 1.

Sequence read statistics for all RNA-seq libraries.

Sample	Replicates	Total reads*	Total mapped readsa	Total uniquely mapped reads	Multiple mapped reads	Total reads mapped (%)
5 DAI - Control	3	27,783,727 (26,881,845)	16,590,034	12,051,719	4,538,315	30.54
5 DAI - Infected	3	28,179,752 (27,266,828)	16,785,042	12,133,033	4,652,009	30.77
200 DAI - Control	3	28,127,128 (26,228,856)	11,459,114	10,187,726	1,271,388	21.84
200 DAI - Infected	3	28,507,485 (26,628,131)	13,302,600	8,138,565	5,164,035	24.97

*Paired-end RNA-seq reads; values in parentheses indicate cleaned, high-quality sequence reads.

^aRNA-seq reads mapped to the Sorghum bicolor (v3.1 release) genome.