Table 2.

Summary of differential abundance at phylum and genus level between distal intestine digesta and swim bladder in rainbow trout.

Phylum	Genus	Log 2 fold differencea	P adjustedb
Firmicutes		3.5035	<0.001
	Cohnella	4.2391	<0.001
	Lactococcus	2.1907	0.017
Bacteroidetes		1.8064	0.003
Tenericutes		6.386	<0.001
	Mycoplasma	4.0288	<0.001
Actinobacteria
	Clavibacter	−8.0276	<0.001
Proteobacteria		−1.9962	0.004
	Rhodobacter	−8.3502	<0.001
	Citrobacter	−5.5939	<0.001
	Sphingomonas	−3.5561	<0.001
	Acinetobacter	−2.491	<0.001
	Halomonas	2.7042	<0.001
	Polynucleobacter	2.3841	0.002
Planctomycetes		−4.0278	<0.001
Verrucomicrobia		−4.6094	<0.001

^aAnalysis done using DESeq2 package. Positive values indicate higher abundance in swim bladder compared to distal intestine digesta. Negative values indicate lower abundance in swim bladder compared to distal intestine digesta.

^bAdjusted P value; accounts for multiple testing and controls the false discovery rate.