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. 2019 Jun 18;5(6):e01950. doi: 10.1016/j.heliyon.2019.e01950

Table 2.

Standard specific (per gram) enthalpy of formation hf, entropy s⁰, and Gibbs free energy of formation gf of dry bacteria, fungi and algae biomass. Empirical formulas reflect elemental composition of microorganisms and are normalized per mole of carbon atoms. To appreciate the size of a cell, a single Magnetospirillum gryphiswaldense cell can be described by C2.31 × 1010H4.68 × 1010O2.93 × 10⁹N6.56 × 1099Fe4.00 × 10⁷. The thermodynamic parameters for entire cells are given by the equation Xcell = mbio · xbio + mw · xw⁰ where Xcell is thermodynamic parameter (Hf, S, or Gf) for a single cell, xbio thermodynamic parameter for biomass from this table, mbio mass of the cell dry matter, xw⁰ thermodynamic parameter for water and mw mass of water in the cell (Section 4.3).

Name Formula Reference hf (kJ/g) s⁰ (J/g K) gf (kJ/g)
BACTERIA
Bacteria (general) CH1.666O0.270N0.200 Abbott and Clamen (1973) −2.97 ± 0.16 1.45 ± 0.29 −1.10 ± 0.24
Aerobacter aerogenes CH1.830O0.550N0.250 Naresh et al. (2011) −4.95 ± 0.27 1.47 ± 0.29 −3.04 ± 0.35
Brevibacterium flavum CH1.80O0.33N0.19 Duboc et al. (1999), Table 9 −3.65 ± 0.20 1.50 ± 0.30 −1.70 ± 0.28
Bacillus cereus CH1.49O0.43N0.22 Duboc et al. (1999), Table 9 −3.91 ± 0.21 1.34 ± 0.26 −2.18 ± 0.29
Corynebacterium glutamicum CH1.78O0.44N0.24 Duboc et al. (1999), Table 9 −4.27 ± 0.23 1.47 ± 0.29 −2.37 ± 0.31
Escherichia coli CH1.770O0.490N0.240 Bauer and Ziv (1976) −4.57 ± 0.24 1.45 ± 0.29 −2.68 ± 0.33
E. coli CH1.74O0.34N0.22 Duboc et al. (1999), Table 9 −3.58 ± 0.19 1.47 ± 0.29 −1.68 ± 0.28
E. coli K-12: grown on Acetic acid CH1.54O0.4N0.21 Battley (1992), Table 3 −3.79 ± 0.20 1.37 ± 0.27 −2.02 ± 0.28
E. coli K-12: grown on glucose CH1.74O0.464N0.26 Battley (1992), Table 3 −4.32 ± 0.23 1.44 ± 0.28 −2.45 ± 0.32
E. coli K-12: grown on glucose CH1.81O0.40N0.22 Battley (1992), Table 3 −4.09 ± 0.22 1.49 ± 0.29 −2.16 ± 0.31
E. coli K-12: grown on glucose CH1.73O0.53N0.235 Battley (1992), Table 3 −4.77 ± 0.26 1.43 ± 0.28 −2.91 ± 0.34
E. coli K-12: grown on glucose CH1.78O0.511N0.237 Battley (1992), Table 3 −4.71 ± 0.25 1.46 ± 0.29 −2.82 ± 0.34
E. coli K-12: grown on glucose CH1.81O0.49N0.234 Battley (1992), Table 3 −4.62 ± 0.25 1.47 ± 0.29 −2.72 ± 0.33
E. coli K-12: grown on glucose CH1.54O0.34N0.24 Battley (1992), Table 3 −3.28 ± 0.18 1.37 ± 0.27 −1.51 ± 0.26
E. coli K-12: grown on Succinic acid CH1.56O0.36N0.23 Battley (1992), Table 3 −3.48 ± 0.19 1.38 ± 0.27 −1.69 ± 0.27
E. coli W: grown on glucose CH1.698O0.427N0.250 Battley (1992), Table 3 −4.07 ± 0.22 1.43 ± 0.28 −2.21 ± 0.30
E. coli W: grown on glycerol CH1.698O0.427N0.250 Battley (1992), Table 3 −4.07 ± 0.22 1.43 ± 0.28 −2.21 ± 0.30
Flavobacterium dehydrogenans CH1.63O0.40N0.21 Duboc et al. (1999), Table 9 −3.90 ± 0.21 1.41 ± 0.28 −2.07 ± 0.29
Klebsiella aerogenes CH1.750O0.430N0.220 Naresh et al. (2011) −4.22 ± 0.23 1.46 ± 0.29 −2.33 ± 0.31
Klebsiella aerogenes CH1.730O0.430N0.240 Naresh et al. (2011) −4.15 ± 0.22 1.45 ± 0.29 −2.27 ± 0.31
Klebsiella aerogenes CH1.750O0.470N0.170 Naresh et al. (2011) −4.61 ± 0.25 1.46 ± 0.29 −2.72 ± 0.33
Klebsiella aerogenes CH1.730O0.430N0.240 Naresh et al. (2011) −4.15 ± 0.22 1.45 ± 0.29 −2.27 ± 0.31
Lactobacillus helveticus CH1.58O0.39N0.23 Duboc et al. (1999), Table 9 −3.72 ± 0.20 1.38 ± 0.27 −1.93 ± 0.28
Magnetospirillum gryphiswaldense CH2.060O0.130N0.280Fe0.00174 Naresh et al. (2011) −2.18 ± 0.12 1.67 ± 0.33 −0.02 ± 0.22
Methanobacterium thermoautotrophicum CH1.63O0.43N0.22 Duboc et al. (1999), Table 9 −4.08 ± 0.22 1.40 ± 0.28 −2.26 ± 0.30
Methylococcus capsulatus CH2.000O0.500N0.270 van Dijken and Harder (1975) −4.79 ± 0.26 1.55 ± 0.30 −2.79 ± 0.35
Paracoccus denitrificans CH1.510O0.460N0.190 Shimizu et al. (1978) −4.21 ± 0.23 1.35 ± 0.27 −2.47 ± 0.30
Paracoccus denitrificans CH1.810O0.510N0.200 Stouthamer (1977) −4.83 ± 0.26 1.47 ± 0.29 −2.92 ± 0.35
Pseudomonas C12B CH2.000O0.520N0.230 Mayberry et al. (1968) −5.01 ± 0.27 1.55 ± 0.30 −3.00 ± 0.36
Saccharopolyspora erythraea (a) CH1.61O0.47N0.19 Duboc et al. (1999), Table 9 −4.39 ± 0.24 1.39 ± 0.27 −2.59 ± 0.32
Saccharopolyspora erythraea (b) CH1.68O0.47N0.16 Duboc et al. (1999), Table 9 −4.55 ± 0.24 1.43 ± 0.28 −2.70 ± 0.33
YEAST
Saccharomyces cerevisiae CH1.613O0.557N0.158P0.012S0.003K0.022Mg0.003Ca0.001 Battley, 1999a,b −5.04 ± 0.27 1.32 ± 0.26 −3.32 ± 0.35
Saccharomyces cerevisiae CH1.640O0.520N0.160 Harrison (1967) −4.82 ± 0.26 1.40 ± 0.28 −3.00 ± 0.34
Saccharomyces cerevisiae CH1.830O0.560N0.170 Kok and Roels (1980) −5.22 ± 0.28 1.48 ± 0.29 −3.31 ± 0.37
Saccharomyces cerevisiae CH1.810O0.510N0.170 Wang et al. (1976) −4.92 ± 0.26 1.48 ± 0.29 −3.00 ± 0.35
Saccharomyces cerevisiae Whi 2+ CH1.65O0.57N0.14 Duboc et al. (1999), Table 9 −5.17 ± 0.28 1.40 ± 0.28 −3.36 ± 0.36
Saccharomyces cerevisiae Whi 2− CH1.64O0.5N0.18 Duboc et al. (1999), Table 9 −4.64 ± 0.25 1.40 ± 0.28 −2.82 ± 0.33
Saccharomyces cerevisiae CBS 426a CH1.56O0.52N0.16 Duboc et al. (1999), Table 9 −4.73 ± 0.25 1.36 ± 0.27 −2.96 ± 0.33
Saccharomyces cerevisiae CBS 426b CH1.52O0.51N0.19 Duboc et al. (1999), Table 9 −4.54 ± 0.24 1.35 ± 0.27 −2.80 ± 0.32
Candida utilis CH1.830O0.540N0.100 Herbert (1976) −5.32 ± 0.29 1.49 ± 0.29 −3.39 ± 0.37
Candida utilis CH1.870O0.560N0.200 Naresh et al. (2011) −5.18 ± 0.28 1.49 ± 0.29 −3.25 ± 0.36
Candida utilis CH1.830O0.460N0.190 Naresh et al. (2011) −4.58 ± 0.25 1.49 ± 0.29 −2.65 ± 0.33
Candida utilis CH1.870O0.560N0.200 Naresh et al. (2011) −5.18 ± 0.28 1.49 ± 0.29 −3.25 ± 0.36
Candida utilis ATCC 9950 CH1.66O0.56N0.07 Duboc et al. (1999), Table 9 −5.34 ± 0.29 1.41 ± 0.28 −3.51 ± 0.37
Candida kefyr NCYC 1441 CH1.66O0.44N0.12 Duboc et al. (1999), Table 9 −4.44 ± 0.24 1.42 ± 0.28 −2.60 ± 0.32
Debaryomyces hansenii CH1.71O0.6N0.10 Duboc et al. (1999), Table 9 −5.52 ± 0.30 1.42 ± 0.28 −3.68 ± 0.38
Debaryomyces nepaliensis CBS 5921 CH1.77O0.63N0.09 Duboc et al. (1999), Table 9 −5.78 ± 0.31 1.45 ± 0.28 −3.90 ± 0.39
Kluyveromyces marxianus NRRL 665 CH1.73O0.53N0.17 Duboc et al. (1999), Table 9 −4.95 ± 0.27 1.44 ± 0.28 −3.08 ± 0.35
Zygosaccharomyces bailii NCYC 563 CH1.63O0.55N0.13 Duboc et al. (1999), Table 9 −5.07 ± 0.27 1.39 ± 0.27 −3.26 ± 0.35
FILAMENTOUS FUNGI
Aspergillus niger CH1.60O0.55N0.10 Duboc et al. (1999), Table 9 −5.12 ± 0.27 1.38 ± 0.27 −3.33 ± 0.36
Aspergillus niger (spores) CH1.50O0.53N0.12 Duboc et al. (1999), Table 9 −4.83 ± 0.26 1.34 ± 0.26 −3.10 ± 0.34
Mucor rouxii CH1.79O0.43N0.07 Duboc et al. (1999), Table 9 −4.68 ± 0.25 1.49 ± 0.29 −2.74 ± 0.34
Neurospora crassa CH1.80O0.45N0.13 Duboc et al. (1999), Table 9 −4.65 ± 0.25 1.49 ± 0.29 −2.72 ± 0.34
Penicillium chrysogenum CH1.87O0.22N0.08 Duboc et al. (1999), Table 9 −3.09 ± 0.17 1.59 ± 0.31 −1.02 ± 0.26
ALGAE
Algae (general) CH2.481O1.038N0.151P0.00943 Wang et al. (2017) −7.77 ± 0.42 1.61 ± 0.32 −5.68 ± 0.51
Chlamydomonas CH1.65O0.39N0.12 Duboc et al. (1999), Table 9 −4.08 ± 0.22 1.43 ± 0.28 −2.23 ± 0.30
Chlorella CH1.719O0.404N0.175P0.0105 Manahan and Manahan (2009) −4.15 ± 0.22 1.44 ± 0.28 −2.29 ± 0.31
Chlorella a sp. MP-1 CH1.793O0.608N0.121 Phukan et al. (2011) −5.59 ± 0.30 1.46 ± 0.29 −3.70 ± 0.39
Chlorella minutissima CH1.714O0.286N0.143 Prajapati et al. (2014) −3.30 ± 0.18 1.48 ± 0.29 −1.38 ± 0.26
Chlorella pyrenoidosa CH1.625O0.250N0.125 Prajapati et al. (2014) −2.89 ± 0.16 1.44 ± 0.28 −1.03 ± 0.24
Chlorella vulgaris CH1.667O0.222N0.111 Prajapati et al. (2014) −2.73 ± 0.15 1.47 ± 0.29 −0.82 ± 0.23
Chrorella sp. ATCC 7516 (medium 5) CH1.76O0.35N0.09 Duboc et al. (1999), Table 9 −4.00 ± 0.21 1.49 ± 0.29 −2.07 ± 0.30
Chlorella Spain sp. ATCC 7516 (medium S) CH1.78O0.36N0.12 Duboc et al. (1999), Table 9 −4.03 ± 0.22 1.50 ± 0.30 −2.08 ± 0.30
Rocan 1 CH1.40O0.50N0.04 Duboc et al. (1999), Table 9 −4.76 ± 0.25 1.29 ± 0.25 −3.08 ± 0.33
Rocan BUV 2 CH1.56O0.59N0.05 Duboc et al. (1999), Table 9 −5.47 ± 0.29 1.36 ± 0.27 −3.70 ± 0.37
Scenedesnus obtusiusculus CH1.64O0.44N0.11 Duboc et al. (1999), Table 9 −4.44 ± 0.24 1.42 ± 0.28 −2.61 ± 0.32
Selenastrum capricornutum CH1.60O0.43N0.08 Duboc et al. (1999), Table 9 −4.41 ± 0.24 1.40 ± 0.28 −2.60 ± 0.32