Table 4. Amino acid sites identified to be under positive selection in different viral proteins (VP1-VP4) by different site specific models (p < 0.25).
Method | VP1 | VP2 | VP3 | VP4 |
---|---|---|---|---|
SLAC | 138 and 148 | 78 | 73 and 76 | - |
FEL | 138 and 148 | 78 | 73 and 76 | - |
IFEL | 43, 138, 153, 172 and 197 | 78 and 134 | 68, 75, 76, 131 and 134 | 61 |
MEME | 5, 13, 43, 133, 138, 148, 153, 172 and 198 | 77, 78, 82, 134, 137, 138, 191 and 194 | 73, 75, 76, 123, 131, 134, 166, 174, 194 and 195 | 61 |