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. Author manuscript; available in PMC: 2020 Jun 20.
Published in final edited form as: Cell Chem Biol. 2019 Mar 28;26(6):781–791.e6. doi: 10.1016/j.chembiol.2019.02.013

Table 1.

Microbiological and biochemical characteristics of INCAs, PAS-M, and MTX

Mtb DHFR
Compounds MIC (μg/mL) Ki(nM)a koff(min-1)b tR (min)c Tm (°C)d Hu DHFR Ki (nM) Mtb Rv2671 Ki (nM)
MTX >100 1.6 ± 0.16 0.056 ± 0.006 18 ± 1.5 76 ± 3.5 0.7 ±0.11 ND
UCP1172 0.03 0.91 ±0.15 0.024 ± 0.003 42 ± 5.3 81 ± 3 60 ± 15 80 ± 6.5
UCP1175 0.125 6.55 ± 0.26 0.072 ± 0.008 14 ± 1.5 73 ± 3.2 51 ±3 1170 ±140
UCP1063 2 8 ± 1.3 0.096 ± 0.015 10.5 ± 1.6 71 ± 2.7 11.1 ± 1.3 52 ± 6.2
PAS-M 0.5e 750 ± 120 0.643 ± 0.125 1.5 ± 0.3 68 ± 1.8 ND 27,500 ± 3500
UCP1163 4 9.1 ± 0.25 ND ND ND 120 ± 7.5 350 ± 12.5
UCP1164 0.5 9.9 ± 0.62 ND ND ND 144 ± 3.5 120 ± 8.5
a

Calculated as Ki=IC50/(1+[S]/KM),

b

koff is assumed to be equal to the activity recovery rate constant from jump-dilution assay,

c

Calculated as the reciprocal of the rate constant (kobs)

d

The Tm of the control (Mtb DHFR+NADPH) was determined to be 65 °C,

e

This value is the MIC of PAS. The MIC of PAS-M was determined to be 8 μg/ml (The difference is most likely due to permeability issues). All the experiments are performed in triplicates.