Table 1.
Mtb DHFR |
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Compounds | MIC (μg/mL) | Ki(nM)a | koff(min-1)b | tR (min)c | Tm (°C)d | Hu DHFR Ki (nM) | Mtb Rv2671 Ki (nM) |
MTX | >100 | 1.6 ± 0.16 | 0.056 ± 0.006 | 18 ± 1.5 | 76 ± 3.5 | 0.7 ±0.11 | ND |
UCP1172 | 0.03 | 0.91 ±0.15 | 0.024 ± 0.003 | 42 ± 5.3 | 81 ± 3 | 60 ± 15 | 80 ± 6.5 |
UCP1175 | 0.125 | 6.55 ± 0.26 | 0.072 ± 0.008 | 14 ± 1.5 | 73 ± 3.2 | 51 ±3 | 1170 ±140 |
UCP1063 | 2 | 8 ± 1.3 | 0.096 ± 0.015 | 10.5 ± 1.6 | 71 ± 2.7 | 11.1 ± 1.3 | 52 ± 6.2 |
PAS-M | 0.5e | 750 ± 120 | 0.643 ± 0.125 | 1.5 ± 0.3 | 68 ± 1.8 | ND | 27,500 ± 3500 |
UCP1163 | 4 | 9.1 ± 0.25 | ND | ND | ND | 120 ± 7.5 | 350 ± 12.5 |
UCP1164 | 0.5 | 9.9 ± 0.62 | ND | ND | ND | 144 ± 3.5 | 120 ± 8.5 |
Calculated as Ki=IC50/(1+[S]/KM),
koff is assumed to be equal to the activity recovery rate constant from jump-dilution assay,
Calculated as the reciprocal of the rate constant (kobs)
The Tm of the control (Mtb DHFR+NADPH) was determined to be 65 °C,
This value is the MIC of PAS. The MIC of PAS-M was determined to be 8 μg/ml (The difference is most likely due to permeability issues). All the experiments are performed in triplicates.