Table 1. Details of predicted V. cholerae vaccine candidates based on genome sequence analysis.
Protein accession | Protein name | Localization | Adhesin Probability | Trans- membrane helices | Antigenicity | Pfam domains | Functional discription |
---|---|---|---|---|---|---|---|
NP_230184.1 | Lipoprotein NlpD | Outer membrane | 0.654 | 0 | 0.7878 | PF01476 | Membrane protein |
NP_230282.1 | Outer membrane protein OmpU | Outer membrane | 0.563 | 0 | 0.74 | PF00267 | Outer membrane protein (porin) |
NP_230492.1 | Accessory colonization factor AcfA | Outer membrane | 0.550 | 0 | 0.7709 | PF13505 | ATPase-coupled sulfate transmembrane transporter activity |
NP_231488.1 | Porin, putative | Outer membrane | 0.518 | 0 | 0.7463 | PF13609 | Outer membrane protein (porin |
NP_233253.1 | Outer membrane protein W | Outer membrane | 0.640 | 0 | 0.7774 | PF03922 | Outer membrane protein |