Table 2.
PCR-RFLP: primer sequences, PCR conditions, restriction enzymes, and fragment lengths.
| Polymorphism | Primer sequences | PCR protocol | Gel electrophoresis results |
|---|---|---|---|
| GSTA1∗C-69T | F, 5′-GCATCAGCTTGCCCTTCA -3′ R, 5′-AAACGCTGTCACCGTCCTG-3′ |
Denature: 94°C for 3 min Followed by 94°C for 30 s Annealing: 56°C for 30 s Extension: 72°C for 30 s #cycles: 30 Final extension: 72°C for 10 min |
Eam1104I incubation at 37°C overnight GSTA1∗CC: 400 bp GSTA1∗CT: 400 bp, 308 bp, and 92 bp GSTA1∗TT: 308 bp and 92 bp |
|
| |||
| GSTP1∗Ile105Val | F, 5′-ACCCCAGGGCTCTATGGGAA-3′ R, 5′-TGAGGGCACAAGAAGCCCCT-3′ |
Denature: 95°C for 10 min Followed by 94°C for 30 s Annealing: 59°C for 30 s Extension: 72°C for 30 s #cycles: 29 Final extension: 72°C for 10 min |
Alw26I incubation at 37°C overnight GSTP1∗Ile/Ile: 176 bp GSTP1∗Ile/Val: 176 bp, 91 bp, and 85 bp GSTP1∗Val/Val: 91 bp and 85 bp |
|
| |||
| GSTM1 | F, 5′-GAACTCCCTGAAAAGCTAAAGC-3′ R, 5′-GTTGGGCTCAAATATACGGTGG-3′ |
Multiplex PCR: Denature: 94°C for 3 min Followed by 94°C for 30 s Annealing: 59°C for 30 s Extension: 72°C for 45 s #cycles: 30 Final extension: 72°C for 4 min |
GSTM1∗active: 215 bp band GSTM1∗null: absent band |
| GSTT1 | F, 5′-TTCCTTACTGGTCCTCACATCTC-3′ R, 5′-TCACGGGATCATGGCCAGCA-3′ |
GSTT1∗active: 480 bp band GSTT1∗null: absent band |
|
| CYP1A1 | F, 5′-GAACTGCCACTT CAGCTGTCT-3′ R, 5′-CAGCTGCATTTG GAAGTGCTC-3′ |
Successful PCR reaction: 312 bp band Unsuccessful PCR reaction: absent band |
|