Figure 2.

Comparison of sequence performance metrics classified by the plant materials used for DNA extraction. (A) The box plot of average read length, on-target rate, and uniformity. The on-target rate is on-target percent of the aligned reads. Uniformity is the percent of bases in all the amplicon-targeted regions covered by at least 0.2× the mean base read depth. (B) Average normalized reads (APKM) per sample across 382 amplicons generated from the 192 mini-core collection. The X and Y axes indicate 382 amplicons sorted in their read coverage and APKM shown as the mean on a log scale, respectively.