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. 2019 Jun 3;8:e44574. doi: 10.7554/eLife.44574

Key resources table.

Reagent type Designation Source or reference Identifiers Additional
information
Sequence-based reagent ON-TARGETplus Non-Targeting Pool, Dharmacon #D-001810-01-05
Sequence-based reagent SMARTpool ON-TARGETplus, Dharmacon, Dharmacon #L-046642-01-0005
Other RPMI-1640 without phenol red Life Technologies #32404014
Antibody Goat anti-mouse IgG Jackson ImmunoResearch #115-005-008 Coverslip coating 2.5 µg/cm2
Antibody Goat anti-mouse IgM Jackson ImmunoResearch #115-005-020 Coverslip coating 2.5 µg/cm2
Antibody Rabbit anti-pZap70(Y319)/pSyk(Y352) Cell Signaling Technologies #2701 Immunofluorescence 1:200
Antibody Rabbit anti-pCD79a(Y182) Cell Signaling Technologies #5173 Immunofluorescence 1:400, Western blot 1:1000
Antibody Rabbit anti-CD79a Gold et al., 1991 Western blot 1:5000
Antibody Rabbit anti-pCD19(Y531) Cell Signaling Technologies #3571 Immunofluorescence 1:200, Western blot 1:1000
Antiboday Rabbit anti-CD19 Cell Signaling Technologies #3574 Western blot 1:1000
Antibody Alexa Fluor 488 goat anti-rabbit IgG Invitrogen #A-11008 Immunofluorescence 1:400
Antibody Alexa Fluor 647 goat anti-rat IgG Invitrogen #A-21247 Immunofluorescence 1:400
Antibody Goat anti-mouse Ig kappa  Southern Biotech #1050–01 Stimulation 20 µg/ml
Antibody Rabbit anti-ACTR3 (Arp3) Santa Cruz #sc-15390 Western blot 1:1000
Antibody Rabbit anti-Arp2 Abcam #ab128934 Western blot 1:1000
Antibody Mouse anti-β-actin Santa Cruz #sc-47778 Western blot 1:5000
Antibody Rabbit anti-p34-Arc/ARPC2 Millipore #07–227 Western blot 1:1000
Antibody Rabbit anti-pERK Cell Signaling Technologies #9101 Western blot 1:1000
Antibody Rabbit anti-ERK Cell Signaling Technologies #9102 Western blot 1:1000
Antibody Rabbit anti-pAkt Cell Signaling Technologies #9271 Western blot 1:1000
Antibody Rabbit anti-Akt Cell Signaling Technologies #9272 Western blot 1:1000
Antibody Goat anti-rabbit IgG(H + L)-HRP conjugate Bio-Rad #170–6515 Western blot 1:3000
Antibody Goat anti-mouse IgM Fab fragment-Cy3-conjugated Jackson ImmunoResearch #115-167-020 Single particle tracking 1 ng/ml
Antibody Rat anti-mouse IgD Fab fragment-Cy3-conjugated ATCC #HB-250 (11–26 c) Fab made by AbLab; SPT 100 ng/ml
Antibody Rat anti-mouse CD19 Fab fragment-Cy3-conjugated ATCC #HB-305 (1D3) Fab made by AbLab; SPT 10 ng/ml
Antibody Rabbit anti-MHC II monoclonal antibody (M5/114) Millipore #MABF33 Coverslip coating 0.25 µg/cm2
Antibody 2.4G2 monoclonal antibody ATCC #HB-197 0.25 µg/ml
Antibody Anti-CD69-FITC eBioscience #11-0691-82 Flow cytometry 1:200
Antibody Anti-CD86-APC eBioscience #17-0862-82 Flow cytometry 1:200
Biological sample (bovine) Fibronectin Sigma-Aldrich #F4759 Coverslip coating 5 µg/ml
Cell line (C. aethiops) COS-7 American Type Culture Collection #CRL-1651; RRID:CVCL_0224
Cell line (M. musculus) A20 American Type Culture Collection #TIB-208; RRID:CVCL_1940
Cell line (M. musculus) A20 D1.3 Batista and Neuberger, 1998 F Batista (Ragon Institute, Cambridge, MA)
Cell line (M. musculus) B16F1 American Type Culture Collection #CRL-6323; RRID:CVCL_0158
Chemical compound, drug CK-666 Calbiochem #CAS 442633-00-3 100 µM
Chemical compound, drug CK-689 Calbiochem #CAS 170930-46-8 100 µM
Chemical compound, drug (S)-nitro-blebbistatin (pnBB) Cayman Chemicals #CAS 856925-71-8 50 µM
Chemical compound, drug HaloTag Janelia Fluor 549 ligand Promega #GA1110 Cell labeling 1:2000
Chemical compound, drug HaloTag tetramethylrhodamine ligand Promega #G8251 Cell labeling 1:2000
Chemical compound, drug Rhodamine phalloidin Thermo Fisher #R415 Immunofluorescence 1:1000
Chemical compound, drug Alexa Fluor 568-conjugated phalloidin Thermo Fisher #A12380 Immunofluorescence 1:1000
Chemical compound, drug Alexa Fluor 532-conjugated-phalloidin Thermo Fisher #A22282 Immunofluorescence 1:1000
Chemical compound, drug ProLong Diamond anti-fade reagent Thermo Fisher #P36965
Chemical compound, drug ECL detection reagent GE Life Sciences #RPN2106
Chemical compound, drug CFSE Invitrogen #C1157 Flow cytometry 2 µM
Chemical compound, drug 7-AAD Thermo Fisher #A1310 Flow cytometry 1:1000
Commercial assay or kit B cell isolation kit Stemcell Technologies #19854A
Commercial assay or kit AMAXA nucleofector kit V Lonza #VCA-1003
Commercial assay or kit Ingenio electroporation solution Mirus #MIR 50117
Commercial assay or kit Lipofectamine 3000 Thermo-Fisher #L3000008
Commercial assay or kit Fab preparation kit Pierce #44985
Genetic reagent (M. musculus) C57BL/6J Jackson Laboratories Stock #000664; MGI:3028467
Genetic reagent (M. musculus) C57BL/6-Tg(IghelMD4)4Ccg/J Jackson Laboratories Stock #002595; MGI:2384162 Goodnow et al., 1988
Genetic reagent (M. musculus) C57BL/6-Tg(Nr4a1-EGFP/cre)820Khog Moran et al., 2011 MGI:5007644 PMID:21606508; K Hogquist (University of Minnesota)
Peptide, recombinant protein BAFF R&D Systems #8876-BF-010 5 ng/ml
Peptide, recombinant protein IL-4 R&D Systems #404 ML-010 5 ng/ml
Recombinant DNA reagent F-tractin-GFP Johnson and Schell, 2009
Recombinant DNA reagent Myosin IIA-GFP Addgene #38297
Recombinant DNA reagent mHEL-GFP Batista et al., 2001 F Batista (Ragon Institute, Cambridge, MA)
Recombinant DNA reagent mHEL-HaloTag PMID: 29388105 M Gold (University of British Columbia)
Recombinant DNA reagent Single-chain anti-mouse Ig kappa antibody Ait-Azzouzene et al., 2005 D Nemazee (Scripps Reseach Institute)
Recombinant DNA reagent β-Actin-GFP R Nabi (University of British Columbia)
Software, algorithm ISIM deconvolution PMID: 26210400
Software, algorithm Softworx Applided Precision Ltd.; GE Healthcare Life Sciences
Software, algorithm FIJI Schindelin et al., 2012 https://imagej.net/Fiji
Software, algorithm MATLAB MathWorks R2015b
Software, algorithm MetaMorph Molecular Devices
Software, algorithm ICY de Chaumont et al., 2012 http://icy.bioimageanalysis.org
Software, algorithm FlowJo Tree Star v10.5.3
Software, algorithm Robust Regression and Outlier Removal (ROUT) Graphad v7 Motulsky and Brown, 2006