Table 1.
KpBest | cBest1 | ||
---|---|---|---|
Residue | Radius (Å) | Residue | Radius (Å) |
I62 | 1.3 | I76 | 1.1 |
I66 | 2.2 | F80 | 1.4 |
F70 | 2.3 | F84 | 2.3 |
I180 | 0.9 | V205I | 0.9 |
I180A | 3.2 | V205 | 1.3 |
Radius was calculated based on measuring the distances between five CH3- (C delta on isoleucine or valine, a1–a5) or H- (benzene ring on phenylalanine, b1–b5):
For isoleucine or valine, radius = (a1 + a2 + a3 + a4 + a5)/(5 × 1.17) – 2.00 (van der Waals radius of CH3-)
For phenylalanine, radius = (b1 + b2 + b3 + b4 + b5)/(5 × 1.17) – 1.20 (van der Waals radius of H-)