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. 2019 Jun 25;9:9224. doi: 10.1038/s41598-019-45661-7

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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The process of common variants detection in highland and lowland native chicken ecotypes. This figure shows that how differential variants were removed between highland and lowland chickens. All comparisons of native chicken ecotype were carried out based on the sex of birds in each step. The frequency threshold was determined to be 100 percent in order to collect common variants between highland and lowland chickens.