Table 4.
Phylum | Class | Order | Family | Genus | P | B |
---|---|---|---|---|---|---|
Proteobacteria | — | — | — | — | 1.2 × 10−15 | −1.29 |
Firmicutes | — | — | — | — | 2.6 × 10−6 | 0.48 |
Bacteroidetes | — | — | — | — | 3.1 × 10−4 | 0.99 |
Firmicutes | Clostridia | — | — | — | 6.1 × 10−21 | 2.33 |
Bacteroidetes | Bacteroidia | — | — | — | 6.9 × 10−9 | 2.10 |
Proteobacteria | Alphaproteobacteria | — | — | — | 1.2 × 10−6 | −0.87 |
Firmicutes | Bacilli | — | — | — | 1.2 × 10−5 | −0.70 |
Proteobacteria | Betaproteobacteria | — | — | — | 5.5 × 10−5 | −0.65 |
Bacteroidetes | Flavobacteriia | — | — | — | 4.8 0.10−3 | −2.34 |
Firmicutes | Clostridia | Clostridiales | — | — | 2.4 × 10−20 | 2.62 |
Bacteroidetes | Bacteroidia | Bacteroidales | — | — | 8.2 × 10−10 | 2.10 |
Actinobacteria | Actinobacteria | Bifidobacteriales | — | — | 1.3 × 10−4 | 1.94 |
Firmicutes | Bacilli | Lactobacillales | — | — | 1.4 × 10−4 | 3.37 |
Proteobacteria | Alphaproteobacteria | Rhizobiales | — | — | 9.8 × 10−4 | −0.57 |
Firmicutes | Bacilli | Bacillales | — | — | 0.002 | −0.49 |
Firmicutes | Clostridia | Clostridiales | Lachnospiraceae | — | 7.8 × 10−13 | 1.73 |
Firmicutes | Clostridia | Clostridiales | Ruminococcaceae | — | 1.6 × 10−12 | 2.01 |
Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | — | 9.8 × 10−12 | −1.27 |
Firmicutes | Bacilli | Bacilliales | Bacillaceae | — | 6.2 × 10−12 | −1.32 |
Proteobacteria | Alphaproteobacteria | Rhizobiales | Brucellaceae | — | 2.8 × 10−8 | −1.51 |
Bacteroidetes | Bacteroidia | Bacteroidales | Bacteroidaceae | — | 3.9 × 10−5 | 1.46 |
Bacteroidetes | Flavobacteriia | Flavobacteriales | Weeksellaceae | — | 5.7 × 10−4 | −2.95 |
Bacteroidetes | Bacteroidia | Bacteroidales | Porphyromonadaceae | — | 8.2 × 10−4 | 2.04 |
Bacteroidetes | Bacteroidia | Bacteroidales | Rikenellaceae | — | 0.011 | 2.38 |
Proteobacteria | Alphaproteobacteria | Rhizobiales | Methylobacteriaceae | — | 0.015 | −1.11 |
Proteobacteria | Betaproteobacteria | Burkholderiales | Alcaligenaceae | — | 0.015 | 2.10 |
Firmicutes | Clostridia | Clostridiales | Clostridiaceae | — | 0.015 | 1.76 |
Actinobacteria | Actinobacteria | Actinomycetales | Microbacteriaceae | — | 0.029 | −0.74 |
Bacteroidetes | Bacteroidia | Bacteroidales | Prevotellaceae | — | 0.031 | 3.60 |
Actinobacteria | Actinobacteria | Bifidobacteriales | Bifidobacteriaceae | — | 0.031 | 0.99 |
Firmicutes | Bacilli | Lactobacillales | Streptococcaceae | — | 0.035 | 1.87 |
Firmicutes | Clostridia | Clostridiales | Ruminococcaceae | Faecalibacterium | 4.8 × 10−16 | 3.16 |
Firmicutes | Clostridia | Clostridiales | Lachnospiraceae | Blautia | 2.1 × 10−14 | 2.60 |
Bacteroidetes | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | 1.8 × 10−10 | 2.72 |
Firmicutes | Clostridia | Clostridiales | Lachnospiraceae | Coprococcus | 3.6 × 10−10 | 2.41 |
Firmicutes | Clostridia | Clostridiales | Lachnospiraceae | Dorea | 1.8 × 10−8 | 3.05 |
Firmicutes | Clostridia | Clostridiales | Lachnospiraceae | Ruminococcus | 6.1 × 10−8 | 3.97 |
Firmicutes | Clostridia | Clostridiales | Ruminococcaceae | Oscillospira | 6.2 × 10−8 | 3.94 |
Firmicutes | Clostridia | Clostridiales | Lachnospiraceae | Roseburia | 9.6 × 10−8 | 3.39 |
Bacteroidetes | Bacteroidia | Bacteroidales | Porphyromonadaceae | Parabacteroides | 1.0 × 10−7 | 3.40 |
Actinobacteria | Actinobacteria | Bifidobacteriales | Bifidobacteriaceae | Bifidobacterium | 1.9 × 10−5 | 2.10 |
Firmicutes | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | 5.5 × 10−5 | 3.55 |
Proteobacteria | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Sutterella | 1.2 × 10−4 | 3.36 |
Firmicutes | Clostridia | Clostridiales | Lachnospiraceae | Lachnospira | 1.2 × 10−4 | 2.02 |
Firmicutes | Clostridia | Clostridiales | Ruminococcaceae | Ruminococcus | 2.1 × 10−4 | 2.76 |
Actinobacteria | Coriobacteriia | Coriobacteriales | Coriobacteriaceae | Collinsella | 1.2 × 10−3 | 2.17 |
Bacteroidetes | Bacteroidia | Bacteroidales | Odoribacteraceae | Odoribacter | 9.3 × 10−3 | 2.48 |
Bacteroidetes | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | 0.021 | 4.51 |
Firmicutes | Clostridia | Clostridiales | Veillonellaceae | Dialister | 0.028 | 1.40 |
Bacteroidetes | Bacteroidia | Bacteroidales | Weeksellaceae | Cloacibacterium | 0.048 | −1.62 |
Bacteria within each taxonomic level are listed by increasing P‐values. P = adjusted P‐value, B = regression coefficient. Red text = increased abundance (positive association), blue = decreased abundance (negative association).