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. 2019 Apr 16;33(7):8386–8405. doi: 10.1096/fj.201802281R

TABLE 7.

Validation of RNA-seq data using real-time PCR for selected genes

Gene symbol Control vs. vehicle
hPOSTN-001 vs. control
hPOSTN-001 vs. vehicle
RNA-seq
Real-time PCR
RNA-seq
Real-time PCR
RNA-seq
Real-time PCR
Fold change P Fold change P Fold change P Fold change P Fold change P Fold change P
MARCKS 686.06 <0.001 −464.80 <0.001 n.s. 0.00
HIST1H3I 299.91 <0.001 1489.74 <0.001 −331.21 <0.001 −1950.95 <0.001 n.s. −1.31 0.128
DMD 292.68 <0.001 185.85 <0.001 −87.37 <0.001 −179.32 <0.001 n.s. 1.04 0.943
ZNF714 287.84 <0.001 693.09 <0.001 −107.52 <0.001 −901.34 <0.001 n.s. −1.30 0.531
ZNF91 275.43 <0.001 4.77 <0.001 −74.55 <0.001 −5.11 <0.001 n.s. −1.07 0.475
MAL2 −16.55 <0.001 −13.83 <0.001 n.s. 1.76 0.001 −12.60 <0.001 −7.88 <0.001
CNTN1 −17.02 <0.001 −15.52 <0.001 −3.61 <0.001 −3.42 <0.001 −61.46 <0.001 −53.02 <0.001
DLEC1 −18.35 <0.001 −337.95 0.001 2.47 0.002 26.16 0.002 −7.43 <0.001 −12.92 0.001
MPZL2 −25.64 <0.001 9.48 <0.001 −2.71 <0.001 −6.10 0.001
DACH2 −76.22 <0.001 −77.45 <0.001 9.84 <0.001 6.35 <0.001 −7.75 <0.001 −12.21 <0.001
GJB2 −12.89 <0.001 −10.09 <0.001 60.18 <0.001 65.11 <0.001 4.67 <0.001 6.45 <0.001
LRP1B −7.45 <0.001 −7.19 <0.001 42.41 <0.001 46.62 <0.001 5.70 <0.001 6.48 <0.001
HSD17B3 n.s. 1.11 0.553 36.43 <0.001 −1.04 0.718 44.18 <0.001 1.07 0.690
ZIC3 −5.20 <0.001 −6.64 <0.001 24.05 <0.001 29.75 <0.001 4.63 <0.001 4.48 0.000
PARVA 80.56 <0.001 3044.90 <0.001 −401.67 <0.001 −3490.57 <0.001 −4.99 0.011 −1.15 0.777
HIST1H2BE 108.21 <0.001 −1.63 0.005 −423.59 <0.001 1.18 0.135 n.s. −1.39 0.005
TSPYL5 250.62 <0.001 136,573.66 0.006 −461.22 <0.001 −61,464.31 0.006 n.s. 2.22 0.222
PCDHB5 94.91 <0.001 107.79 <0.001 −667.80 <0.001 −120.79 <0.001 −7.04 <0.001 −1.12 0.195
CMKLR1 3.49 0.002 4.49 <0.001 9.17 <0.001 11.63 <0.001 32.04 <0.001 52.22 <0.001
TRPM3 2.84 0.015 −1.51 0.558 8.81 <0.001 17.71 <0.001 25.00 <0.001 11.75 <0.001
DRD2 12.71 <0.001 16.03 <0.001 1.66 0.006 1.50 0.008 21.12 <0.001 24.12 <0.001
OLFM3 n.s. 1.27 0.077 −50.24 <0.001 −336.41 <0.001 −41.78 <0.001 −265.75 <0.001
ITGA8 −1.82 <0.001 −1.44 0.005 −35.53 <0.001 −101.14 <0.001 −64.64 <0.001 −145.75 <0.001
LUZP2 −3.57 <0.001 −6.12 <0.001 −19.31 <0.001 −5.42 <0.001 −68.84 <0.001 −33.15 <0.001
RIPPLY3 n.s. −1.13 0.286 −52.75 <0.001 −61.36 <0.001 −70.45 <0.001 −69.33 <0.001

n.s., not significant.