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. 2019 Jun 17;8:e47061. doi: 10.7554/eLife.47061

Key resources table.

Reagent type
(species) or
resource
Designation Source or reference Identifiers Additional
information
Gene (Danio rerio) pappaap170 Wolman et al., 2015 RRID:ZFIN_ZDB-GENO-190322-4 single nucleotide nonsense mutationC > T at position 964 in Exon 3
Strain, strain background (Danio rerio) Tg(myo6b:mitoGCaMP3) Esterberg et al., 2014 RRID:ZFIN_ZDB-GENO-141008-1
Strain, strain background (Danio rerio) Tg(brn3c:GFP) Xiao et al., 2005 RRID:ZFIN_ZDB-ALT-050728-2
Strain, strain background (Danio rerio) Tg(mnx1:GFP) Rastegar et al., 2008 RRID:ZFIN_ZDB-GENO-140605-2
Strain, strain background (Danio rerio) Tg(hsp70:dnIGF1Ra-GFP) Kamei et al., 2011 RRID:ZFIN_ZDB-GENO-110614-4
Strain, strain background (Danio rerio) Tg(hsp70:pappaa-GFP) this paper Materials and methods subsection maintenance of zebrafish
Strain, strain background (Danio rerio) TLF Zebrafish International Resource Center (ZIRC) RRID:ZFIN_ZDB-GENO-990623-2
Antibody anti-myosinVI (rabbit polyclonal) Proteus biosciences RRID:AB_10013626 1:200
Antibody anti-SOX2 (rabbit polyclonal) Abcam RRID:AB_2341193 1:200
Antibody anti-GFP (rabbit polyclonal) ThermoFisher Scientific RRID:AB_221569 1:500
Antibody Alexa 488, secondary (rabbit polyclonal) ThermoFisher Scientific RRID:AB_2576217 1:500
Peptide, recombinant protein IGF-1 Cell sciences Catalog number: DU100
Other FM1-43 ThermoFisher
Scientific
Catalog number:
T3136 PubChem CID:6508724
3 uM for 30 s
Other CellROX deep red ThermoFisher Scientific Catalog number: C10422 10 uM for 60 min
Other mitoSOX red ThermoFisher Scientific Catalog number:
M36008
1 uM for 30 min
Other mitotracker greenFM ThermoFisher Scientific Catalog number:
M7514 PubChem
CID:70691021
100 nM for 5 min
Other TMRE ThermoFisher Scientific Catalog number: T669 PubChem CID:2762682 25 nM for 20 min
Other 0.25% trypsin-EDTA Sigma-Aldrich Catalog number: T3924
Other TRIzol Invitrogen Catalog number: 15596026
Other Sso fast Eva Green Supermix BioRad Catalog number: 1725200
Chemical compound, drug Neomycin Sigma-Aldrich Catalog number: N1142 PubChem CID:24897464
Chemical compound, drug NBI-31772 Fisher Scientific Catalog number: 519210
Chemical compound, drug antimycin-a Sigma-Aldrich Catalog number: A8674 PubChem
CID: 24891355
Chemical compound, drug CsA Abcam Catalog number: ab120114 PubChem
ID: 5284373
Chemical compound, drug mitoTEMPO Sigma-Aldrich Catalog number: SML0737 PubChem
CID: 134828258
Chemical compound, drug NVP-AEW541 Selleck Catalog number: S1034 PubChem
CID: 11476171
Commercial assay or kit SuperScript II Reverse Transcriptase Invitrogen Catalog number: 18064014
Software, algorithm Fluoview (FV10-ASW 4.2) Olympus RRID:SCR_014215
Software, algorithm ImageJ PMID: 22743772 RRID:SCR_003070
Software, algorithm GraphPad Prism GraphPad RRID:SCR_002798