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. 2019 May 27;85(7):1585–1597. doi: 10.1111/bcp.13943

Table 2.

Predictors of log‐transformed thiopurine metabolites (mean ± standard deviation)

Variables rsID Maj Min Genotype Dominant Recessive
Maj hom Het Min hom P FDR P Maj hom + het Min hom P FDR P Maj hom Het + min hom P FDR P
6‐TGN
ATIC rs16853834 C T 2.56 ± 0.20 2.65 ± 0.22 2.59 ± 0.12 0.0903 0.9914 2.60 ± 0.21 2.59 ± 0.12 0.9149 0.9553 2.56 ± 0.20 2.64 ± 0.20 0.0415 0.9077
GART rs2070388 G C 2.57 ± 0.20 2.69 ± 0.19 2.51 ± 0.35 0.0090 0.3135 2.60 ± 0.20 2.51 ± 0.35 0.2263 0.9553 2.57 ± 0.20 2.65 ± 0.23 0.0351 0.9077
HIVEP2‐AIG1 a rs200148 G A 2.60 ± 0.20 2.41 ± 0.35 0.0194 0.5052
XDH rs2295475 G A 2.57 ± 0.25 2.59 ± 0.18 2.71 ± 0.19 0.0634 0.9914 2.58 ± 0.21 2.71 ± 0.19 0.0235 0.9553 2.57 ± 0.25 2.62 ± 0.18 0.2216 0.9077
NUDT15 rs116855232 C T 2.64 ± 0.19 2.51 ± 0.15 1.95 ± 0.27 <.0001 <.0001 2.61 ± 0.19 1.95 ± 0.27 <.0001 <.0001 2.64 ± 0.19 2.46 ± 0.24 <.0001 0.0024
NUDT15 rs186364861 G A 2.62 ± 0.19 2.39 ± 0.28 <.0001 0.0040
6‐MeMPN
ATIC rs3821353 T G 3.48 ± 0.67 3.76 ± 0.46 3.52 ± 0.56 0.0438 0.9027 3.62 ± 0.59 3.52 ± 0.56 0.3589 0.9666 3.48 ± 0.67 3.65 ± 0.52 0.1125 0.7348
ATIC rs16853834 C T 3.53 ± 0.57 3.74 ± 0.52 3.77 ± 0.46 0.0779 0.9027 3.62 ± 0.56 3.77 ± 0.46 0.3735 0.9666 3.53 ± 0.57 3.74 ± 0.51 0.0240 0.7348
FAM8A6P rs1040637 G A 3.64 ± 0.55 3.32 ± 0.73 3.42 ± 0.54 0.1131 0.9027 3.6 ± 0.57 3.42 ± 0.54 0.5977 0.9978 3.64 ± 0.55 3.34 ± 0.69 0.0383 0.7348
MTHFD1 rs2236225 G A 3.51 ± 0.62 3.71 ± 0.47 3.98 ± 0.39 0.0775 0.9027 3.59 ± 0.57 3.98 ± 0.39 0.2443 0.9666 3.51 ± 0.62 3.73 ± 0.46 0.0338 0.7348
MTHFR rs1801133 C T 3.58 ± 0.60 3.55 ± 0.59 3.88 ± 0.33 0.1226 0.9027 3.56 ± 0.59 3.88 ± 0.33 0.0418 0.9666 3.58 ± 0.60 3.60 ± 0.57 0.8647 0.9763
NUDT15 rs147390019 G A 3.62 ± 0.55 2.97 ± 0.94 0.0239 0.9027
NUDT15 rs186364861 G A 3.62 ± 0.58 3.42 ± 0.43 0.2224 0.9027
TPMT *1 Other 3.62 ± 0.55 3.05 ± 0.69 0.0156 0.9027
6‐MeMPN/6‐TGN ratio
ABCC4 rs2274407 C A 0.98 ± 0.58 1.08 ± 0.49 −0.09 ± 0.00 0.0932 0.9573 1.01 ± 0.55 −0.09 ± 0.00 0.0481 0.9388 0.98 ± 0.58 1.05 ± 0.51 0.5103 0.9371
ATIC rs3821353 T G 0.88 ± 0.72 1.18 ± 0.43 0.92 ± 0.57 0.0329 0.9573 1.03 ± 0.61 0.92 ± 0.57 0.3294 0.9388 0.88 ± 0.72 1.06 ± 0.51 0.1006 0.9371
FAM8A6P rs1040637 G A 1.04 ± 0.55 0.74 ± 0.78 0.75 ± 0.77 0.1339 0.9573 1.01 ± 0.58 0.75 ± 0.77 0.4579 0.9550 1.04 ± 0.55 0.74 ± 0.75 0.0446 0.9371
GNG2 rs12886319 T C 1.14 ± 0.50 0.89 ± 0.65 1.10 ± 0.43 0.0507 0.9573 0.99 ± 0.61 1.10 ± 0.43 0.4289 0.9550 1.14 ± 0.50 0.93 ± 0.61 0.0481 0.9371
MTHFD1 rs2236225 G A 0.91 ± 0.66 1.10 ± 0.41 1.41 ± 0.28 0.0905 0.9573 0.98 ± 0.58 1.41 ± 0.28 0.2080 0.9388 0.91 ± 0.66 1.12 ± 0.41 0.0457 0.9371
NUDT15 rs147390019 G A 1.02 ± 0.56 0.37 ± 1.17 0.0269 0.9573
NUDT15 rs186364861 G A 1.00 ± 0.60 1.03 ± 0.39 0.0269 0.9864
TPMT *1 Other 1.03 ± 0.57 0.39 ± 0.50 0.0085 0.8871

Abbreviations: FDR, false‐discovery rate; Het, heterozygote; Maj: major allele; Maj hom, major allele homozygote; Min hom, minor allele homozygote; Min, minor allele.

P‐values < 0.05 calculated by linear regression analysis are shown in bold.

a

Intronic SNP between theAIG1 and HIVEP2 gene.