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. Author manuscript; available in PMC: 2019 Jun 27.
Published in final edited form as: Environ Mol Mutagen. 2012 Apr 17;53(5):358–368. doi: 10.1002/em.21696

TABLE III.

Mutations in the cII Gene of Spleen From AA-Treated and Control Male Big Blue® Rats

Number of mutations (independent)
AA (mg/kg body weight)
Positiona Mutationb Amino acid change Sequence context 5′ → 3′c Control 0.1 1.0 10.0
−18 C → G N/A tatCTAagg 1
−13 G → A N/A ctaAGGaaa 1
−1 T → C N/A ttaCATatg 1
1 A → G Met → Val catATGgtt 1 4 (2)
A → T Met → Leu catATGgtt 1
2 T → A Met → Lys catATGgtt 1 d 1
T → C Met → Thr catATGgtt 2 d
3 G → A Met → Ile catATGgtt 1 1
G → C Met → Ile catATGgtt 1
G → T Met → Ile catATGgtt 2(1) 1
4 G → C Val → Leu atgGTTcgt 1
14 A → T Asn → Ile gcaAACaaa 1
15 C → A Asn → Lys gcaAACaaa 1
16 A → T Lys → Stop aacAAAcgc 2
19 C → T Arg → Cys aaaCGCaac 1
24 C → G Asn → Lys cgcAACgag 1
25 G → A Glu → Lys aacGAGgct 3 2
G → T Glu → Stop aacGAGgct 1 1
26 A → G Glu → Gly aacGAGgct 1
A → T Glu → Val aacGAGgct 3
28 G → A Ala → Thr gagGCTcta 1
G → C Ala → Pro gagGCTcta 1
31 C → G Leu → Val gctCTAcga 1 1
32 T → C Leu → Pro gctCTAcga 1
34 C → G Arg → Gly ctaCGAatc 1
C → T Arg → Stop ctaCGAatc 4 1 1
35 G → A Arg → Gln ctaCGAatc 1 1 1
G → C Arg → Pro ctaCGAatc 1
G → T Arg → Leu ctaCGAatc 1
38 T → A Ile → Asn cgaATCgag 1
39 C → G Ile → Met cgaATCgag 1
40 G → A Glu → Lys atcGAGagt 1 2
43 A → G Ser → Gly gagAGTgcg 1
47 C → G Ala → Gly agtGCGttg 1
−C Frameshift agtGCGttg 1
49 T → A Leu → Met gcgTTGctt 1
50 T → C Leu → Ser gcgTTGctt 1
51 G → T Leu → Phe gcgTTGctt 1
53 T → C Leu → Pro ttgCTTaac 1
55 A → C Asn → His cttAACaaa 1
58 A → T Lys → Stop aacAAAatc 1
A → G Lys → Glu aacAAAatc 1
60 +AATCGC Frameshift aacAAAatc 1
60 A → T Lys → Lys aacAAAatc 1
63 C → G Ile → Met gcaATCgca 1
64 G → A Ala → Thr atcGCAatg 1 4
68–69 −TG Frameshift gcaATGctt 1
71 T → C Leu → Pro atgCTTgga 1 1
73 G → A Gly → Arg cttGGAact 1 1
74 G → T Gly → Val cttGGAact 1
77 C → A Thr → Asn ggaACTgag 1
82 A → G Lys → Glu gagAAGaca 1
86 C → G Thr → Arg aagACAgcg 2
89 C → A Ala → Glu acaGCGgaa 2(1)
C → T Ala → Val acaGCGgaa 1 2 1
90–91 −G Frameshift acaGCGGAAgct 1
94 G → A Ala → Thr gaaGCTgtg 1
G → T Ala → Ser gaaGCTgtg 1
99–101 −G Frameshift gctGTGGGCgtt 1
100 G → A Gly → Ser gtgGGCgtt 1
G → T Gly → Cys gtgGGCgtt 1
101 G → T Gly → Val gtgGGCgtt 1
103 G → A Val → Ile ggcGTTgat 3 (2) 3 (2) 5 (2) 3
G → C Val → Leu ggcGTTgat 1 1
G → T Val → Phe ggcGTTgat 1
104 T → A Val → Asp ggcGTTgat 1 1
108 T → A Asp → Glu gttGATaag 1
109 A → G Lys → Glu gatAAGtcg 1
A → T Lys → Stop gatAAGtcg 1
110 A → T Lys → Met gatAAGtcg 2
111 G → T Lys → Asn gatAAGtcg 1
113 C → T Ser → Leu aagTCGcag 1 1 1
115 C → T Gln → Stop tcgCAGatc 1
116 A → T Gln → Leu tcgCAGatc 1
118 A → T Ile → Phe cagATCagc 1
119 T → A Ile → Asn cagATCagc 1
120 C → G Ile → Met cagATCagc 1
124 A → T Arg → Trp agcAGGtgg 2
125 G → T Arg → Met agcAGGtgg 1
127 T → A Trp → Arg aggTGGaag 3
129–132 +A Frameshift aggTGGAAGagg 1
129 G → A Trp → Stop aggTGGaag 1
G → C Trp → cys aggTGGaag 1
130 A → T Lys → Stop tggAAGagg 1 d
135 G → C Arg → Ser aagAGGgac 1
139 T → A Trp → Arg gacTGGatt 4 (3)
141 G → T Trp → Cys gacTGGatt 1 1
145 C → A Pro → Thr attCCAaag 1
146 C → A Pro → Gln attCCAaag 1
150 G → T Lys → Asn ccaAAGttc 1 1 1
158 T → C Met → Thr tcaATGctg 1
159 G → A Met → Ile tcaATGctg 1
161 T → A Leu → Gln atgCTGctt 2
T → C Leu → Pro atgCTGctt 1
164 T → A Leu → His ctgCTTgct 2
167 C → G Ala → Gly cttGCTgtt 1
172 C → A Leu → Ile gttCTTgaa 1
C → T Leu → Phe gttCTTgaa 1
−C Frameshift gttCTTgaa 1
175 G → C Glu → Gln cttGAAtgg 1
G → T Glu → Stop cttGAAtgg 1
176 A → T Glu → Val cttGAAtgg 1 2
178/185 +G Frameshift gaaTGGGGGGTCgtt 4 (2) 4 (3) 5 (2) 5 (4)
178 T → A Trp → Arg gaaTGGggg 3
179 G → A Trp → Stop gaaTGGggg 1 3
179–184 −G Frameshift gaaTGGGGGGTCgtt 1 2 (1) 3 6 (3)
181 G → T Gly → Trp tggGGGgtc 1
182 G → T Gly → Val tggGGGgtc 3
185 T → A Val → Asp gggGTCgtt 1 2
T → C Val → Ala gggGTCgtt 1
T → G Val → Gly gggGTCgtt 1 1
190 G → C Asp → Gln gttGACgac 1
G → T Asp → Tyr gttGACgac 1
190–192 −GAC Frameshift gttGACgac 1
191 A → G Asp → Gly gttGACgac 1
191–192 AC → TT Asp → Val gttGACgac 1
193 G → A Asp → Asn gacGACgac 1 1 5 (3)
G → C Asp → His gacGACgac 4(1)
G → T Asp → Tyr gacGACgac 1 2
193–194 GA → TT Asp → Tyr gacGACgac 1
194 A → T Asp → Val gacGACgac 1
196 G → A Asp → Asn gacGACatg 4 (3) 2 1 3
G → C Asp → His gacGACatg 2
G → T Asp → Tyr gacGACatg 1 1
199 A → G Met → Val gacATGgct 4 (3)
200 T → A Met → Lys gacATGgct 1
T → C Met → Thr gacATGgct 1
201–202 −G Frameshift gacATGGCTcga 1
202 G → C Ala → Pro atgGCTcga 1
206 G → A Arg → Gln gctCGAttg 2 (1) 1
G → C Arg → Pro gctCGAttg 1 1
208 T → A Leu → Met cgaTTGgcg 2(1)
209 T → A Leu → Stop cgaTTGgcg 2
210 G → T Leu → Phe cgaTTGgcg 3
211 G → C Ala → Pro ttgGCGcga 1
212 C → A Ala → Glu ttgGCGcga 2
C → G Ala → Gly ttgGCGcga 1
C → T Ala → Val ttgGCGcga 2 7 (2) 3 6 (5)
214 C → A Arg → Arg gcgCGAcaa 1
C → T Arg → Stop gcgCGAcaa 3 3 (2) 3 (2) 10(5)
215 G → T Arg → Leu gcgCGAcaa 1
217 C → T Gln → Stop cgaCAAgtt 1
218 A → T Gln → Leu cgaCAAgtt 3
220 G → A Val → Ile caaGTTgct 1
G → T Val → Phe caaGTTgct 1
224 C → A Ala → Asp gttGCTgcg 1
226 G → C Ala → Pro gctGCGatt 1
228 −G Frameshift gctGCGatt 1 3 (1)
230 T → A Ile → Asn gcgATTctc 1
232 C → T Leu → Phe attCTCacc 1
233 T → A Leu → His attCTCacc 1
T → C Leu → Pro attCTCacc 1
240 −T Frameshift accAATaaa 1
241 A → T Lys → Stop aatAAAaaa 1
241–246 −A Frameshift aatAAAAAAcgc 1
253 −G Frameshift ccgGCGgca 1
274 C → A Gln → Lys gaaCAAatc 1
C → G Gln → Glu gaaCAAatc 1
275 A → T Gln → Leu gaaCAAatc 1
276 A → T Gln → His gaaCAAatc 1
287 A → T Glu → Val atgGAGttc 1
292 T → A Stop → Arg ttcTGAggt 1
T → C Stop → Arg ttcTGAggt 1
293 G → C Stop → Ser ttcTGAggt 1
G → T Stop → Leu ttcTGAggt 1
294 A → G Stop → Trp ttcTGAggt 1
A → T Stop → Cys ttcTGAggt 1 3
Total 52 (47) 41 (31) 61 (54) 196 (173)

Abbreviations: −, deletion; +, insertion

a

Position 1 is the first base of the start codon in the cII coding sequence.

b

Presented in term of sequence change on nontranscribed DNA strand.

c

Uppercase indicates target codon and target bases are underlined.

d

Complex mutation.