TABLE III.
Number of mutations (independent) | |||||||
---|---|---|---|---|---|---|---|
AA (mg/kg body weight) | |||||||
Positiona | Mutationb | Amino acid change | Sequence context 5′ → 3′c | Control | 0.1 | 1.0 | 10.0 |
−18 | C → G | N/A | tatCTAagg | 1 | |||
−13 | G → A | N/A | ctaAGGaaa | 1 | |||
−1 | T → C | N/A | ttaCATatg | 1 | |||
1 | A → G | Met → Val | catATGgtt | 1 | 4 (2) | ||
A → T | Met → Leu | catATGgtt | 1 | ||||
2 | T → A | Met → Lys | catATGgtt | 1 d | 1 | ||
T → C | Met → Thr | catATGgtt | 2 d | ||||
3 | G → A | Met → Ile | catATGgtt | 1 | 1 | ||
G → C | Met → Ile | catATGgtt | 1 | ||||
G → T | Met → Ile | catATGgtt | 2(1) | 1 | |||
4 | G → C | Val → Leu | atgGTTcgt | 1 | |||
14 | A → T | Asn → Ile | gcaAACaaa | 1 | |||
15 | C → A | Asn → Lys | gcaAACaaa | 1 | |||
16 | A → T | Lys → Stop | aacAAAcgc | 2 | |||
19 | C → T | Arg → Cys | aaaCGCaac | 1 | |||
24 | C → G | Asn → Lys | cgcAACgag | 1 | |||
25 | G → A | Glu → Lys | aacGAGgct | 3 | 2 | ||
G → T | Glu → Stop | aacGAGgct | 1 | 1 | |||
26 | A → G | Glu → Gly | aacGAGgct | 1 | |||
A → T | Glu → Val | aacGAGgct | 3 | ||||
28 | G → A | Ala → Thr | gagGCTcta | 1 | |||
G → C | Ala → Pro | gagGCTcta | 1 | ||||
31 | C → G | Leu → Val | gctCTAcga | 1 | 1 | ||
32 | T → C | Leu → Pro | gctCTAcga | 1 | |||
34 | C → G | Arg → Gly | ctaCGAatc | 1 | |||
C → T | Arg → Stop | ctaCGAatc | 4 | 1 | 1 | ||
35 | G → A | Arg → Gln | ctaCGAatc | 1 | 1 | 1 | |
G → C | Arg → Pro | ctaCGAatc | 1 | ||||
G → T | Arg → Leu | ctaCGAatc | 1 | ||||
38 | T → A | Ile → Asn | cgaATCgag | 1 | |||
39 | C → G | Ile → Met | cgaATCgag | 1 | |||
40 | G → A | Glu → Lys | atcGAGagt | 1 | 2 | ||
43 | A → G | Ser → Gly | gagAGTgcg | 1 | |||
47 | C → G | Ala → Gly | agtGCGttg | 1 | |||
−C | Frameshift | agtGCGttg | 1 | ||||
49 | T → A | Leu → Met | gcgTTGctt | 1 | |||
50 | T → C | Leu → Ser | gcgTTGctt | 1 | |||
51 | G → T | Leu → Phe | gcgTTGctt | 1 | |||
53 | T → C | Leu → Pro | ttgCTTaac | 1 | |||
55 | A → C | Asn → His | cttAACaaa | 1 | |||
58 | A → T | Lys → Stop | aacAAAatc | 1 | |||
A → G | Lys → Glu | aacAAAatc | 1 | ||||
60 | +AATCGC | Frameshift | aacAAAatc | 1 | |||
60 | A → T | Lys → Lys | aacAAAatc | 1 | |||
63 | C → G | Ile → Met | gcaATCgca | 1 | |||
64 | G → A | Ala → Thr | atcGCAatg | 1 | 4 | ||
68–69 | −TG | Frameshift | gcaATGctt | 1 | |||
71 | T → C | Leu → Pro | atgCTTgga | 1 | 1 | ||
73 | G → A | Gly → Arg | cttGGAact | 1 | 1 | ||
74 | G → T | Gly → Val | cttGGAact | 1 | |||
77 | C → A | Thr → Asn | ggaACTgag | 1 | |||
82 | A → G | Lys → Glu | gagAAGaca | 1 | |||
86 | C → G | Thr → Arg | aagACAgcg | 2 | |||
89 | C → A | Ala → Glu | acaGCGgaa | 2(1) | |||
C → T | Ala → Val | acaGCGgaa | 1 | 2 | 1 | ||
90–91 | −G | Frameshift | acaGCGGAAgct | 1 | |||
94 | G → A | Ala → Thr | gaaGCTgtg | 1 | |||
G → T | Ala → Ser | gaaGCTgtg | 1 | ||||
99–101 | −G | Frameshift | gctGTGGGCgtt | 1 | |||
100 | G → A | Gly → Ser | gtgGGCgtt | 1 | |||
G → T | Gly → Cys | gtgGGCgtt | 1 | ||||
101 | G → T | Gly → Val | gtgGGCgtt | 1 | |||
103 | G → A | Val → Ile | ggcGTTgat | 3 (2) | 3 (2) | 5 (2) | 3 |
G → C | Val → Leu | ggcGTTgat | 1 | 1 | |||
G → T | Val → Phe | ggcGTTgat | 1 | ||||
104 | T → A | Val → Asp | ggcGTTgat | 1 | 1 | ||
108 | T → A | Asp → Glu | gttGATaag | 1 | |||
109 | A → G | Lys → Glu | gatAAGtcg | 1 | |||
A → T | Lys → Stop | gatAAGtcg | 1 | ||||
110 | A → T | Lys → Met | gatAAGtcg | 2 | |||
111 | G → T | Lys → Asn | gatAAGtcg | 1 | |||
113 | C → T | Ser → Leu | aagTCGcag | 1 | 1 | 1 | |
115 | C → T | Gln → Stop | tcgCAGatc | 1 | |||
116 | A → T | Gln → Leu | tcgCAGatc | 1 | |||
118 | A → T | Ile → Phe | cagATCagc | 1 | |||
119 | T → A | Ile → Asn | cagATCagc | 1 | |||
120 | C → G | Ile → Met | cagATCagc | 1 | |||
124 | A → T | Arg → Trp | agcAGGtgg | 2 | |||
125 | G → T | Arg → Met | agcAGGtgg | 1 | |||
127 | T → A | Trp → Arg | aggTGGaag | 3 | |||
129–132 | +A | Frameshift | aggTGGAAGagg | 1 | |||
129 | G → A | Trp → Stop | aggTGGaag | 1 | |||
G → C | Trp → cys | aggTGGaag | 1 | ||||
130 | A → T | Lys → Stop | tggAAGagg | 1 d | |||
135 | G → C | Arg → Ser | aagAGGgac | 1 | |||
139 | T → A | Trp → Arg | gacTGGatt | 4 (3) | |||
141 | G → T | Trp → Cys | gacTGGatt | 1 | 1 | ||
145 | C → A | Pro → Thr | attCCAaag | 1 | |||
146 | C → A | Pro → Gln | attCCAaag | 1 | |||
150 | G → T | Lys → Asn | ccaAAGttc | 1 | 1 | 1 | |
158 | T → C | Met → Thr | tcaATGctg | 1 | |||
159 | G → A | Met → Ile | tcaATGctg | 1 | |||
161 | T → A | Leu → Gln | atgCTGctt | 2 | |||
T → C | Leu → Pro | atgCTGctt | 1 | ||||
164 | T → A | Leu → His | ctgCTTgct | 2 | |||
167 | C → G | Ala → Gly | cttGCTgtt | 1 | |||
172 | C → A | Leu → Ile | gttCTTgaa | 1 | |||
C → T | Leu → Phe | gttCTTgaa | 1 | ||||
−C | Frameshift | gttCTTgaa | 1 | ||||
175 | G → C | Glu → Gln | cttGAAtgg | 1 | |||
G → T | Glu → Stop | cttGAAtgg | 1 | ||||
176 | A → T | Glu → Val | cttGAAtgg | 1 | 2 | ||
178/185 | +G | Frameshift | gaaTGGGGGGTCgtt | 4 (2) | 4 (3) | 5 (2) | 5 (4) |
178 | T → A | Trp → Arg | gaaTGGggg | 3 | |||
179 | G → A | Trp → Stop | gaaTGGggg | 1 | 3 | ||
179–184 | −G | Frameshift | gaaTGGGGGGTCgtt | 1 | 2 (1) | 3 | 6 (3) |
181 | G → T | Gly → Trp | tggGGGgtc | 1 | |||
182 | G → T | Gly → Val | tggGGGgtc | 3 | |||
185 | T → A | Val → Asp | gggGTCgtt | 1 | 2 | ||
T → C | Val → Ala | gggGTCgtt | 1 | ||||
T → G | Val → Gly | gggGTCgtt | 1 | 1 | |||
190 | G → C | Asp → Gln | gttGACgac | 1 | |||
G → T | Asp → Tyr | gttGACgac | 1 | ||||
190–192 | −GAC | Frameshift | gttGACgac | 1 | |||
191 | A → G | Asp → Gly | gttGACgac | 1 | |||
191–192 | AC → TT | Asp → Val | gttGACgac | 1 | |||
193 | G → A | Asp → Asn | gacGACgac | 1 | 1 | 5 (3) | |
G → C | Asp → His | gacGACgac | 4(1) | ||||
G → T | Asp → Tyr | gacGACgac | 1 | 2 | |||
193–194 | GA → TT | Asp → Tyr | gacGACgac | 1 | |||
194 | A → T | Asp → Val | gacGACgac | 1 | |||
196 | G → A | Asp → Asn | gacGACatg | 4 (3) | 2 | 1 | 3 |
G → C | Asp → His | gacGACatg | 2 | ||||
G → T | Asp → Tyr | gacGACatg | 1 | 1 | |||
199 | A → G | Met → Val | gacATGgct | 4 (3) | |||
200 | T → A | Met → Lys | gacATGgct | 1 | |||
T → C | Met → Thr | gacATGgct | 1 | ||||
201–202 | −G | Frameshift | gacATGGCTcga | 1 | |||
202 | G → C | Ala → Pro | atgGCTcga | 1 | |||
206 | G → A | Arg → Gln | gctCGAttg | 2 (1) | 1 | ||
G → C | Arg → Pro | gctCGAttg | 1 | 1 | |||
208 | T → A | Leu → Met | cgaTTGgcg | 2(1) | |||
209 | T → A | Leu → Stop | cgaTTGgcg | 2 | |||
210 | G → T | Leu → Phe | cgaTTGgcg | 3 | |||
211 | G → C | Ala → Pro | ttgGCGcga | 1 | |||
212 | C → A | Ala → Glu | ttgGCGcga | 2 | |||
C → G | Ala → Gly | ttgGCGcga | 1 | ||||
C → T | Ala → Val | ttgGCGcga | 2 | 7 (2) | 3 | 6 (5) | |
214 | C → A | Arg → Arg | gcgCGAcaa | 1 | |||
C → T | Arg → Stop | gcgCGAcaa | 3 | 3 (2) | 3 (2) | 10(5) | |
215 | G → T | Arg → Leu | gcgCGAcaa | 1 | |||
217 | C → T | Gln → Stop | cgaCAAgtt | 1 | |||
218 | A → T | Gln → Leu | cgaCAAgtt | 3 | |||
220 | G → A | Val → Ile | caaGTTgct | 1 | |||
G → T | Val → Phe | caaGTTgct | 1 | ||||
224 | C → A | Ala → Asp | gttGCTgcg | 1 | |||
226 | G → C | Ala → Pro | gctGCGatt | 1 | |||
228 | −G | Frameshift | gctGCGatt | 1 | 3 (1) | ||
230 | T → A | Ile → Asn | gcgATTctc | 1 | |||
232 | C → T | Leu → Phe | attCTCacc | 1 | |||
233 | T → A | Leu → His | attCTCacc | 1 | |||
T → C | Leu → Pro | attCTCacc | 1 | ||||
240 | −T | Frameshift | accAATaaa | 1 | |||
241 | A → T | Lys → Stop | aatAAAaaa | 1 | |||
241–246 | −A | Frameshift | aatAAAAAAcgc | 1 | |||
253 | −G | Frameshift | ccgGCGgca | 1 | |||
274 | C → A | Gln → Lys | gaaCAAatc | 1 | |||
C → G | Gln → Glu | gaaCAAatc | 1 | ||||
275 | A → T | Gln → Leu | gaaCAAatc | 1 | |||
276 | A → T | Gln → His | gaaCAAatc | 1 | |||
287 | A → T | Glu → Val | atgGAGttc | 1 | |||
292 | T → A | Stop → Arg | ttcTGAggt | 1 | |||
T → C | Stop → Arg | ttcTGAggt | 1 | ||||
293 | G → C | Stop → Ser | ttcTGAggt | 1 | |||
G → T | Stop → Leu | ttcTGAggt | 1 | ||||
294 | A → G | Stop → Trp | ttcTGAggt | 1 | |||
A → T | Stop → Cys | ttcTGAggt | 1 | 3 | |||
Total | 52 (47) | 41 (31) | 61 (54) | 196 (173) |
Abbreviations: −, deletion; +, insertion
Position 1 is the first base of the start codon in the cII coding sequence.
Presented in term of sequence change on nontranscribed DNA strand.
Uppercase indicates target codon and target bases are underlined.
Complex mutation.