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. 2019 Jun 6;8(6):e12907. doi: 10.2196/12907

Table 1.

Time and events table for Assessing Predictors of Infant Respiratory Syncytial Virus Effects and Severity study.

Samples/data Birth cohort visits RSVa positive illness

Birth 1 month Illness surveillance Acute (day 2-7) Day 12-16 Day 25-35
Demographic Xb X c X X X
Clinical X X X X X
Cord blood for antibody X
Buccal swab for cytomegalovirus polymerase chain reaction X X X
Nasal swab RSV RT-PCRd X
Nasal swab for:

Quantitative RSV RT-PCR X X

Viral coinfection X X

RSV gene sequencing X X

Microbiome X X X
Nasal wash X X X
Nasal brush for epithelial cell RNAseqe X X X
Blood for:

Peripheral blood mononuclear cells flow cytometry X X X

CDf4, CD8, B, natural killer RNAseq X X

Antibody assays X X X

aRSV: respiratory syncytial virus.

bX indicates samples at this time point.

cIndicates no samples collected at time point.

dRT-PCR: reverse-transcriptase polymerase chain reaction.

eRNAseq: ribonucleic acid sequencing.

fCD: cluster of differentiation.