Table 7.
Reaction parameters used in the models
| Reaction | kon (M−1 s−1) | k-off (s−1) | α (s−1) |
|---|---|---|---|
| DARPP-32 + CdK5 → DARPP-32 - CdK5 | 5.6e + 06 | 12 | |
| DARPP-32 - CdK5 → DARPP-32T75 + CdK5 | 3 | ||
| DARPP-32 + CK1 → DARPP-32 - CK1 | 4.4e + 06 | 12 | |
| DARPP-32 - CK1 → DARPP-32S130 + CK1 | 3 | ||
| DARPP-32 + PKA → DARPP-32 - PKA | 5.6e + 06 | 10.8 | |
| DARPP-32 - PKA → DARPP-32T34 + PKA | 2.7 | ||
| DARPP-32T34 + CdK5 → DARPP-32T34 - CdK5 | 5.6e + 06 | 12 | |
| DARPP-32T34 - CdK5 → DARPP-32T34,T75 + CdK5 | 3 | ||
| DARPP-32T34 + CK1 → DARPP-32T34 - CK1 | 4.4e + 06 | 12 | |
| DARPP-32T34 - CK1 → DARPP-32T34,S130 + CK1 | 3 | ||
| DARPP-32T34 + PP2B → DARPP-32T34 - PP2B | 1e + 08 | 16 | |
| DARPP-32T34 - PP2B → DARPP-32 + PP2B | 4 | ||
| DARPP-32T75 + CK1 → DARPP-32T75 - CK1 | 4.4e + 06 | 12 | |
| DARPP-32T75 - CK1 → DARPP-32T75,S130 + CK1 | 3 | ||
| DARPP-32T75 + PKA → DARPP-32T75 - PKA | 5.6e + 06 | 10.8 | |
| DARPP-32T75 - PKA → DARPP-32T34,T75 + PKA | 0 | ||
| DARPP-32T75 + PP2A → DARPP-32T75 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T75 - PP2A → DARPP-32 + PP2A | 10 | ||
| DARPP-32T75 + PP2AP → DARPP-32T75 - PP2AP | 1.7e + 07 | 24 | |
| DARPP-32T75 - PP2AP → DARPP-32T75 + PP2AP | 40 | ||
| DARPP-32S130 + CdK5 → DARPP-32S130 - CdK5 | 5.6e + 06 | 12 | |
| DARPP-32S130 - CdK5 → DARPP-32T75,S130 + CdK5 | 3 | ||
| DARPP-32S130 + PKA → DARPP-32S130 - PKA | 5.6e + 06 | 10.8 | |
| DARPP-32S130 - PKA → DARPP-32T34,S130 + PKA | 2.7 | ||
| DARPP-32S130 + PP2C → DARPP-32S130 - PP2C | 7.5e + 06 | 12 | |
| DARPP-32S130 - PP2C → DARPP-32 + PP2C | 3 | ||
| DARPP-32T34,T75 + CK1 → DARPP-32T34,T75 - CK1 | 4.4e + 06 | 12 | |
| DARPP-32T34,T75 - CK1 → DARPP-32T34,T75,S130 + CK1 | 3 | ||
| DARPP-32T34,T75 + PP2A → DARPP-32T34,T75 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T34,T75 - PP2A → DARPP-32T34 + PP2A | 10 | ||
| DARPP-32T34,T75 + PP2AP → DARPP-32T34,T75 - PP2AP | 1.7e + 07 | 40 | |
| DARPP-32T34,T75 - PP2AP → DARPP-32T34 + PP2AP | 24 | ||
| DARPP-32T34,T75 + PP2B → DARPP-32T34,T75 - PP2B | 1e + 08 | 1,600 | |
| DARPP-32T34,T75 - PP2B → DARPP-32T75 + PP2B | 4 | ||
| DARPP-32T34,S130 + CdK5 → DARPP-32T34,S130 - CdK5 | 5.6e + 06 | 12 | |
| DARPP-32T34,S130 - CdK5 → DARPP-32T34,T75,S130 + CdK5 | 3 | ||
| DARPP-32T34,S130 + PP2B → DARPP-32T34,S130 - PP2B | 7.5e + 04 | 0.12 | |
| DARPP-32T34,S130 - PP2B → DARPP-32S130 + PP2B | 0.03 | ||
| DARPP-32T34,S130 + PP2C → DARPP-32T34,S130 - PP2C | 7.5e + 06 | 12 | |
| DARPP-32T34,S130 - PP2C → DARPP-32T34 + PP2C | 3 | ||
| DARPP-32T75,S130 + PKA → DARPP-32T75,S130 - PKA | 5.6e + 06 | 10.8 | |
| DARPP-32T75,S130 - PKA → DARPP-32T34,T75,S130 + PKA | 0 | ||
| DARPP-32T75,S130 + PP2A → DARPP-32T75,S130 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T75,S130 - PP2A → DARPP-32S130 + PP2A | 10 | ||
| DARPP-32T75,S130 + PP2AP → DARPP-32T75,S130 - PP2AP | 1.7e + 07 | 40 | |
| DARPP-32T75,S130 - PP2AP → DARPP-32S130 + PP2AP | 24 | ||
| DARPP-32T75,S130 + PP2C → DARPP-32T75,S130 - PP2C | 7.5e + 06 | 12 | |
| DARPP-32T75,S130 - PP2C → DARPP-32T75 + PP2C | 3 | ||
| DARPP-32T34,T75,S130 + PP2A → DARPP-32T34,T75,S130 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T34,T75,S130 - PP2A → DARPP-32T34,S130 + PP2A | 10 | ||
| DARPP-32T34,T75,S130 + PP2AP → DARPP-32T34,T75,S130 - PP2AP | 1.7e + 07 | 40 | |
| DARPP-32T34,T75,S130 - PP2AP → DARPP-32T34,S130 + PP2AP | 24 | ||
| DARPP-32T34,T75,S130 + PP2B → DARPP-32T34,T75,S130 - PP2B | 7.5e + 04 | 120 | |
| DARPP-32T34,T75,S130 - PP2B → DARPP-32T75,S130 + PP2B | 0.03 | ||
| DARPP-32T34,T75 + PP2C → DARPP-32T34,T75,S130 - PP2C | 7.5e + 06 | 3 | |
| DARPP-32T34,T75,S130 - PP2C → DARPP-32T34,T75,S130 + PP2C | 12 | ||
| CK1P + PP2B → CK1P - PP2B | 3e + 08 | 24 | |
| CK1P - PP2B → CK1 + PP2B | 6 | ||
| CK1 → CK1P | 1 | ||
| PDE + PKA → PDE - PKA | 6e + 06 | 36 | |
| PDE - PKA → PDEP + PKA | 9 | ||
| PDEP → PDE | 0.1 | ||
| PP2A + PKA → PP2A - PKA | 1e + 08 | 16 | |
| PP2A - PKA → PP2AP + PKA | 4 | ||
| PP2AP → PP2A | 5 | ||
| PP2B (inactive) + Ca2+ → PP2B (inactive) - Ca2+ | 1e + 15 | 1 | |
| PP2B (inactive) - Ca2+ + Ca2+ → PP2B | 3e + 15 | 1 | |
| R2C2 + cAMP → cAMP - R2C2 | 5.4e + 07 | 33 | |
| cAMP - R2C2 + cAMP → cAMP2 - R2C2 | 5.4e + 07 | 33 | |
| cAMP2 - R2C2 + cAMP → cAMP3 - R2C2 | 7.5e + 07 | 110 | |
| cAMP3 - R2C2 + cAMP → cAMP4 - R2C2 | 7.5e + 07 | 32.5 | |
| cAMP4-R2C + PKA → cAMP4 - R2C2 | 1.8e + 07 | 60 | |
| cAMP4-R2 + PKA → cAMP4 - R2C | 1.8e + 07 | 60 | |
| cAMP + PDE → cAMP - PDE | 2.52e + 06 | 40 | |
| cAMP-PDE → AMP + PDE | 10 | ||
| cAMP + PDEP → cAMP -PDEP | 5.04e + 06 | 80 | |
| cAMP-PDEP → AMP + PDEP | 20 | ||
| Ca2+ → NULL | 0.6 | ||
| Ca2+ + CK2 → CK2-Ca2+ | 1e + 15 | 3e + 15 | |
| CK2-Ca2+ + DARPP-32 → DARPP-32 - CK2 - Ca2+ | 4.4e5 | 12 | |
| DARPP-32-CK2-Ca2+ → DARPP-32S97 + CK2 - Ca2+ | 3 | ||
| DARPP-32S97 + PP2A → DARPP-32S97 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32S97 - PP2A → DARPP-32 + PP2A | 10 | ||
| DARPP-32T34,S97 + PP2A → DARPP-32T34,S97 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T34,S97 - PP2A → DARPP-32T34 + PP2A | 10 | ||
| DARPP-32T34,S97 - PP2A → DARPP-32S97 + PP2A | 10 | ||
| DARPP-32T75,S97 + PP2A → DARPP-32T75,S97 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T75,S97 - PP2A → DARPP-32T75 + PP2A | 10 | ||
| DARPP-32T75,S97 - PP2A → DARPP-32S97 + PP2A | 10 | ||
| DARPP-32S97,S130 + PP2A → DARPP-32S97,S130 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32S97,S130 - PP2A → DARPP-32S130 + PP2A | 10 | ||
| DARPP-32S97,S130 - PP2A → DARPP-32S97 + PP2A | 10 | ||
| DARPP-32T34,T75,S97 + PP2A → DARPP-32T34,T75,S97 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T34,T75,S97 - PP2A → DARPP-32T75,S97 + PP2A | 10 | ||
| DARPP-32T34,T75,S97 - PP2A → DARPP-32T34,S97 + PP2A | 10 | ||
| DARPP-32T34,T75,S97 - PP2A → DARPP-32T34,T75 + PP2A | 10 | ||
| DARPP-32T75,S97,S130 + PP2A → DARPP-32T75,S97,S130 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T75,S97,S130 - PP2A → DARPP-32S97,S130 + PP2A | 10 | ||
| DARPP-32T75,S97,S130 - PP2A → DARPP-32T75,S130 + PP2A | 10 | ||
| DARPP-32T75,S97,S130 - PP2A → DARPP-32T75,S97 + PP2A | 10 | ||
| DARPP-32T34,S97,S130 + PP2A → DARPP-32T34,S97,S130 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T34,S97,S130 - PP2A → DARPP-32S97,S130 + PP2A | 10 | ||
| DARPP-32T34,S97,S130 - PP2A → DARPP-32T34,S130 + PP2A | 10 | ||
| DARPP-32T34,S97,S130 - PP2A → DARPP-32T34,S97 + PP2A | 10 | ||
| DARPP-32T34,T75,S130 + PP2A → DARPP-32T34,T75,S130 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T34,T75,S130 - PP2A → DARPP-32T75,S130 + PP2A | 10 | ||
| DARPP-32T34,T75,S130 - PP2A → DARPP-32T34,S130 + PP2A | 10 | ||
| DARPP-32T34,T75,S130 - PP2A → DARPP-32T34,T75 + PP2A | 10 | ||
| DARPP-32T34,T75,S97,S130 + PP2A → DARPP-32T34,T75,S97,S130 - PP2A | 3.8e + 06 | 24 | |
| DARPP-32T34,T75,S97,S130 - PP2A → DARPP-32T75,S97,S130 + PP2A | 10 | ||
| DARPP-32T34,T75,S97,S130 - PP2A → DARPP-32T34,S97,S130 + PP2A | 10 | ||
| DARPP-32T34,T75,S97,S130 - PP2A → DARPP-32T34,T75,S130 + PP2A | 10 | ||
| DARPP-32T34,T75,S97,S130 - PP2A → DARPP-32T34,T75 + PP2A | 10 | ||
| DARPP-32S97 + CdK5 → DARPP-32S97 - CdK5 | 5.6e + 06 | 12 | |
| DARPP-32S97 - CdK5 → DARPP-32T75,S97 + CdK5 | 3 | ||
| DARPP-32T34,S97 + CdK5 → DARPP-32T34,S97 - CdK5 | 5.6e + 06 | 12 | |
| DARPP-32T34,S97 - CdK5 → DARPP-32T34,T75,S97 + CdK5 | 3 | ||
| DARPP-32S97,S130 + CdK5 → DARPP-32S97,S130 - CdK5 | 5.6e + 06 | 12 | |
| DARPP-32S97,S130 - CdK5 → DARPP-32T75,S97,S130 + CdK5 | 3 | ||
| DARPP-32T34,S97,S130 + CdK5 → DARPP-32T34,S97,S130 - CdK5 | 5.6e + 06 | 12 | |
| DARPP-32T34,S97,S130 - CdK5 → DARPP-32T34,T75,S97,S130 + CdK5 | 3 | ||
| DARPP-32S97 + CK1 → DARPP-32S97 - CK1 | 4.4e + 06 | 12 | |
| DARPP-32S97 - CK1 → DARPP-32S97,S130 + CK1 | 3 | ||
| DARPP-32T34,S97 + CK1 → DARPP-32T34,S97 - CK1 | 4.4e + 06 | 12 | |
| DARPP-32T34,S97 - CK1 → DARPP-32T34,S97,S130 + CK1 | 3 | ||
| DARPP-32T75,S97 + CK1 → DARPP-32T75,S97 - CK1 | 4.4e + 06 | 12 | |
| DARPP-32T75,S97 - CK1 → DARPP-32T75,S97,S130 + CK1 | 3 | ||
| DARPP-32T34,T75,S97 + CK1 → DARPP-32T34,T75,S97 - CK1 | 4.4e + 06 | 12 | |
| DARPP-32T34,T75,S97 - CK1 → DARPP-32T34,T75,S97,S130 + CK1 | 3 | ||
| DARPP-32T34,S97 + PP2B → DARPP-32T34,S97 - PP2B | 7.5e + 04 | 120 | |
| DARPP-32T34,S97 - PP2B → DARPP-32S97 + PP2B | 0.03 | ||
| DARPP-32T34,T75,S97 + PP2B → DARPP-32T34,T75,S97 - PP2B | 7.5e + 04 | 120 | |
| DARPP-32T34,T75,S97 - PP2B → DARPP-32T75,S97 + PP2B | 0.03 | ||
| DARPP-32T34,S97,S130 + PP2B → DARPP-32T34,S97,S130 - PP2B | 7.5e + 04 | 120 | |
| DARPP-32T34,S97,S130 - PP2B → DARPP-32S97,S130 + PP2B | 0.03 | ||
| DARPP-32T34,T75,S130 + PP2B → DARPP-32T34,T75,S130 - PP2B | 7.5e + 04 | 120 | |
| DARPP-32T34,T75,S130 - PP2B → DARPP-32T75,S130 + PP2B | 0.03 | ||
| DARPP-32T34,T75,S97,S130 + PP2B → DARPP-32T34,T75,S97,S130 - PP2B | 7.5e + 04 | 120 | |
| DARPP-32T34,T75,S97,S130 - PP2B → DARPP-32T75,S97,S130 + PP2B | 0.03 | ||
| DARPP-32S97,S130 + PP2C → DARPP-32S97,S130 - PP2C | 7.5e + 06 | 12 | |
| DARPP-32S97,S130 - PP2C → DARPP-32S97 + PP2C | 3 | ||
| DARPP-32T34,S97,S130 + PP2C → DARPP-32T34,S97,S130 - PP2C | 7.5e + 06 | 12 | |
| DARPP-32T34,S97,S130 - PP2C → DARPP-32T34,S97 + PP2C | 3 | ||
| DARPP-32T75,S97,S130 + PP2C → DARPP-32T75,S97,S130 - PP2C | 7.5e + 06 | 12 | |
| DARPP-32T75,S97,S130 - PP2C → DARPP-32T75,S97 + PP2C | 3 | ||
| DARPP-32T34,T75,S97,S130 + PP2C → DARPP-32T34,T75,S97,S130 - PP2C | 7.5e + 06 | 12 | |
| DARPP-32T34,T75,S97,S130 - PP2C → DARPP-32T34,T75,S97 + PP2C | 3 |