Table 3.
Nucleotide identity (%) of three complete ORF sequences with 30 published reference sequences available in GenBank.
Sequence name | GD-YJHSEY2N | GD-YJHSEY3N | GD-LDCT1 | MH493896 China | MH493895 China | MH493894 China | Genotype |
---|---|---|---|---|---|---|---|
GD-YJHSEY2N | – | 99.9 | 81.2 | 84.2 | 83.0 | 80.9 | Genotype 2 |
GD-YJHSEY3N | 99.9 | – | 81.2 | 84.1 | 83.0 | 80.9 | |
GD-LDCT1 | 81.2 | 81.2 | – | 94.1 | 96.6 | 98.7 | Genotype 3 |
MF167290 Germany | 83.6 | 83.6 | 82.0 | 82.4 | 82.1 | 82.0 | Genotype 1 |
MF167291 Germany | 83.6 | 83.6 | 82.0 | 82.4 | 82.1 | 81.9 | |
LT594521 Germany | 83.6 | 83.5 | 82.1 | 82.3 | 82.2 | 82.1 | |
MH499643 China | 83.3 | 83.3 | 81.5 | 82.0 | 81.4 | 81.4 | |
MH499647 China | 83.3 | 83.3 | 81.6 | 82.1 | 81.5 | 81.4 | |
KU194229 United States | 83.2 | 83.2 | 81.6 | 82.1 | 81.6 | 81.5 | |
KX929062 Netherlands | 83.3 | 83.3 | 82.1 | 82.5 | 82.0 | 81.9 | |
KU041639 Germany | 83.6 | 83.6 | 81.6 | 82.0 | 81.8 | 81.6 | |
KX778724 Austria | 83.4 | 83.5 | 81.9 | 82.3 | 82.0 | 81.7 | |
KY624591 China | 83.4 | 83.5 | 81.4 | 82.1 | 81.7 | 81.3 | |
MF979135 Korea | 83.6 | 83.7 | 81.7 | 82.1 | 81.8 | 81.3 | |
MG792803 China | 84.4 | 84.4 | 81.6 | 82.1 | 81.4 | 81.2 | |
KY652092 China | 83.3 | 83.3 | 81.5 | 82.2 | 81.5 | 81.3 | |
KY475592 China | 83.5 | 83.5 | 81.5 | 82.2 | 81.5 | 81.3 | |
MH715893 China | 83.5 | 83.4 | 81.5 | 82.1 | 81.5 | 81.3 | |
MH499646 China | 83.3 | 83.3 | 81.4 | 82.1 | 81.4 | 81.2 | |
MH499645 China | 83.4 | 83.3 | 81.5 | 82.2 | 81.5 | 81.3 | |
KR011347 United States | 83.5 | 83.5 | 81.7 | 82.0 | 81.4 | 81.5 | |
MF377344 China | 83.1 | 83.1 | 81.3 | 82.0 | 81.4 | 81.2 | |
MH102210 China | 83.0 | 83.0 | 81.2 | 81.9 | 81.2 | 81.0 | |
KY475593 China | 94.7 | 94.6 | 81.0 | 83.9 | 82.3 | 80.8 | Genotype 2 |
MH499642 China | 96.2 | 96.2 | 81.2 | 84.1 | 82.6 | 80.9 | |
MH499644 China | 96.4 | 96.4 | 81.2 | 84.2 | 82.6 | 80.9 | |
MH499648 China | 96.8 | 96.8 | 81.1 | 84.0 | 82.5 | 80.8 | |
KX950761 China | 99.5 | 99.5 | 81.1 | 84.0 | 82.9 | 80.8 | |
KX950762 China | 99.6 | 99.5 | 81.1 | 84.0 | 83.0 | 80.8 | |
KY612413 China | 99.5 | 99.4 | 81.0 | 84.0 | 82.9 | 80.8 | |
MH493896 China | 84.2 | 84.1 | 94.1 | – | 95.3 | 94.1 | Genotype 3 |
MH493895 China | 83.0 | 83.0 | 96.6 | 95.3 | – | 97.5 | |
MH493894 China | 80.9 | 80.9 | 98.7 | 94.1 | 97.5 | – |