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. 2018 Nov 23;35(13):2251–2257. doi: 10.1093/bioinformatics/bty961

Table 1.

Bias and RMSE of estimating marginal correlations Σ among three traits

Bias
RMSE
Σ12 Σ13 Σ23 Σ12 Σ13 Σ23
h2=0.1 Σ^s 0.002 –0.027 0.018 0.012 0.030 0.022
Σ^r –0.002 0.000001 –0.0003 0.011 0.016 0.014
h2=0.3 Σ^s 0.009 –0.058 0.039 0.017 0.062 0.044
Σ^r –0.001 –0.004 0.003 0.014 0.020 0.018
h2=0.5 Σ^s 0.010 –0.061 0.043 0.022 0.068 0.049
Σ^r –0.0005 –0.008 0.006 0.019 0.028 0.024

Note: h2 is the overall heritability; Σ=h2Σg+(1h2)Σe. Σ^s is the sample correlation-based estimate, and Σ^r is the LD score regression-based estimate.