Table 2. Motif analysis of modified bases from PacBio SMRT sequencing in wild type S. pyogenes strain MEW123.
| Motif* | Type | Motifs in genome | Mean modQV | Mean coverage |
|---|---|---|---|---|
| GCANNNNNNNTTYG | m6A | 412 | 332.64 | 245.02 |
| CRAANNNNNNNTGC | m6A | 412 | 282.18 | 237.32 |
| THTWGAAGA | unknown | 410 | 44.74 | 240.57 |
| ANDYVGCAD | m6A | 3502 | 86.17 | 241.02 |
| TNRRDDDG | unknown | 34390 | 44.88 | 235.68 |
| TNNNDNNH | unknown | 746710 | 47.81 | 235.15 |
| THRGCNTWNH | unknown | 3107 | 43.39 | 237.84 |
| AGNNAVNW | m6A | 32122 | 78.13 | 239.29 |
| TNNNCRV | unknown | 77468 | 45.11 | 235.03 |
| VAHNBAVYW | m6A | 27467 | 76.34 | 242.45 |
| THNNDVNG | unknown | 96451 | 43.43 | 237.89 |
*modified base is bolded and underlined