Table 1.
The free energy of opening, as determined by WHAM analysis of umbrella sampling simulations, for cNTnC, cNTnC–cTnI, cNTnC–bepridil, cNTnC–cTnI–bepridil, cNTnC–dfbp-o, cNTnC–cTnI–dfbp-o, cNTnC–DPA, cNTnC–cTnI–DPA, cNTnC–W7, cNTnC–cTnI–W7. The free energy values were calculated from triplicate umbrella sampling simulations.
cTnC complex | Free energy of opening(kcal/mol) |
---|---|
Holo cTnC | 13.8 ± 2.2 |
Tnl-bound Holo | −6.3 ± 0.2 |
Bepridil | 1.6 ± 2.8 |
Tnl-bound Bepridil | −2.6 ± 0.4 |
dFBP-o | 3.4 ± 0.5 |
Tnl-bound dFBP-o | −9.9 ± 4.9 |
DPA | 3.1 ± 0.5 |
Tnl-bound DPA | −11.8 ± 1.5 |
W7 | 3.1 ± 0.8 |
Tnl-bound W7 | −1.7 ± 0.7 |