Skip to main content
. Author manuscript; available in PMC: 2020 Jun 24.
Published in final edited form as: J Chem Inf Model. 2019 May 8;59(6):3018–3035. doi: 10.1021/acs.jcim.9b00210

Table 7.

Percent correct, <PC>S, for each set when the top Sampling/ACS protocol is identified for that set based on the available data following which the FragMap scaling factors are optimized using the presented machine learning protocol.

SILCS Default FragMap Scoring ML Reweighted FragMap Scoring
System Sampling Protocol ACS <PC>S <PC>S
FXR-GSK Exhaustive rLP = 10 Å GAX18 0.64 0.73
HDM2-Turiso Exhaustive rLP = 10 Å GAS18 0.72 0.75
HSP90-Abbvie Local GAX18 0.63 0.64
MCL1-Fletcher Exhaustive rLP = 5 Å GAX18 0.82 0.87
MCL1-Friberg Exhaustive rLP = 10 Å GAX18 0.84 0.85
P38 Goldstein Exhaustive rLP = 10 Å GAX18 0.68 0.78
TRMD-GSK Local GAX18 0.69 0.79
TYK2 Liang Local SS18 0.71 0.70
Average 0.72 0.76